Modeling Practices

This paper constitutes a radical departure from the existing philosophical literature on models, modeling-practices, and model-based science. I argue that the various entities and practices called 'models' and 'modeling-practices' are too diverse, too context-sensitive, and serve too many scientific purposes and roles, as to allow for a general philosophical analysis. From this recognition an alternative view emerges that I shall dub model anarchism.

In this paper, I shall provide a novel response to the argument from context-sensitivity against truth-conditional semantics. It is often argued that the contextual influences on truth-conditions outstrip the resources of standard truth-conditional accounts, and so truth-conditional semantics rests on a mistake. The argument assumes that truth-conditional semantics is legitimate if and only if natural language sentences have truth-conditions. I shall argue that this assumption is mistaken. Truth-conditional analyses should be viewed as idealised approximations of the complexities of natural language (...) meaning. From this perspective, disparity between the scientific model and its real-world target is to be expected. I elaborate on what such an approach to semantics would look like. (shrink)

This essay replies to Michael Morreau and Erik J. Olsson’s ‘Learning from Ranters: The Effect of Information Resistance on the Epistemic Quality of Social Network Deliberation’. Morreau and Olsson use simulations to suggest that false ranters—agents who do not update their beliefs and only ever assert false claims—do not diminish the epistemic value of deliberation for other agents and can even be epistemically valuable. They argue conclude that “Our study suggests that including [false] ranters has little or no negative effect (...) on the epistemic value of social deliberation. Including them can even be epistemically beneficial. -/- I present concerns about their model and I enumerate some epistemic values that their discussion omits. I first raise two interrelated worries: (i.) The model is too simple; real-life irresponsible assertors do not speak uniformly falsely, for example. And tracking testifiers’ reliability demands cognitive resources. (ii.) In reality, we do not treat a person’s assertions that p as evidence that not p, especially not for all their assertions. I argue that these simplifications threat Morreau and Olsson conclusion. -/- I then enumerate epistemic values and disvalues that Morreau and Olsson do not discuss, but which bear on the value of false assertions and false ranters in their simulation and in real life. Candidate disvalues include: False beliefs of ranters; cognitive costs of discerning and recalling testifiers’ reliability; distrust; epistemic polarisatin; a prevalence of false assertion can impugn all testimony, including that of reliable testifiers. And candidate values include: a prevalence of true beliefs and assertions; attention being directed towards the right things; well-functioning trust relationships; believing people’s assertions; healthy discussion; epistemic respect; learning together. -/- . (shrink)

Over the last decades, network-based approaches have become highly popular in diverse fields of biology, including neuroscience, ecology, molecular biology and genetics. While these approaches continue to grow very rapidly, some of their conceptual and methodological aspects still require a programmatic foundation. This challenge particularly concerns the question of whether a generalized account of explanatory, organisational and descriptive levels of networks can be applied universally across biological sciences. To this end, this highly interdisciplinary theme issue focuses on the definition, motivation (...) and application of key concepts in biological network science, such as explanatory power of distinctively network explanations, network levels, and network hierarchies. (shrink)

The purpose of this article is to establish a connection between modelling practices and interpretive approaches in quantum mechanics, taking as a starting point the literature on scientific representation. Different types of modalities play different roles in scientific representation. I postulate that the way theoretical structures are interpreted in this respect affects the way models are constructed. In quantum mechanics, this would be the case in particular of initial conditions and observables. I examine two formulations of quantum mechanics, the standard (...) wave-function formulation and the consistent histories formulation, and show that they correspond to opposite stances, which confirms my approach. Finally, I examine possible strategies for deciding between these stances. (shrink)

In this article we argue that idealizations and limiting cases in models play an exploratory role in science. Four senses of exploration are presented: exploration of the structure and representational capacities of theory; proof-of-principle demonstrations; potential explanations; and exploring the suitability of target systems. We illustrate our claims through three case studies, including the Aharonov-Bohm effect, the emergence of anyons and fractional quantum statistics, and the Hubbard model of the Mott phase transitions. We end by reflecting on how our case (...) studies and claims compare to accounts of idealization in the philosophy of science literature such as Michael Weisberg’s three-fold taxonomy. (shrink)

When it originated in the late 19th century, psychometrics was a field with both a scientific and a social mission: psychometrics provided new methods for research into individual differences, and at the same time, these psychometric instruments were considered a means to create a new social order. In contrast, contemporary psychometrics - due to its highly technical nature and its limited involvement in substantive psychological research - has created the impression of being a value-free discipline. In this article, we develop (...) a contrasting characterization of contemporary psychometrics as a value-laden discipline. We expose four such values: that individual differences are quantitative (rather than qualitative), that measurement should be objective in a specific sense, that test items should be fair, and that utility of a model is more important than its truth. Our goal is not to criticize psychometrics for employing these values, but rather to bring them into the open and to show that these values are not inevitable and are in need of systematic evaluation. (shrink)

We critically engage two traditional views of scientific data and outline a novel philosophical view that we call the pragmatic-representational view of data. On the PR view, data are representations that are the product of a process of inquiry, and they should be evaluated in terms of their adequacy or fitness for particular purposes. Some important implications of the PR view for data assessment, related to misrepresentation, context-sensitivity, and complementary use, are highlighted. The PR view provides insight into the common (...) but little-discussed practices of iteratively reusing and repurposing data, which result in many datasets’ having a phylogeny—an origin and complex evolutionary history—that is relevant to their evaluation and future use. We relate these insights to the open-data and data-rescue movements, and highlight several future avenues of research that build on the PR view of data. (shrink)

The “universality” of critical phenomena is much discussed in philosophy of scientific explanation, idealizations and philosophy of physics. Lange and Reutlinger recently opposed Batterman concerning the role of some deliberate distortions in unifying a large class of phenomena, regardless of microscopic constitution. They argue for an essential explanatory role for “commonalities” rather than that of idealizations. Building on Batterman's insight, this article aims to show that assessing the differences between the universality of critical phenomena and two paradigmatic cases of “commonality (...) strategy”—the ideal gas model and the harmonic oscillator model—is necessary to avoid the objections raised by Lange and Reutlinger. Taking these universal explanations as benchmarks for critical phenomena reveals the importance of the different roles played by analogies underlying the use of the models. A special combination of physical and formal analogies allows one to explain the epistemic autonomy of the universality of critical phenomena through an explicative loop. (shrink)

Precision medicine and molecular systems medicine (MSM) are highly utilized and successful approaches to improve understanding, diagnosis, and treatment of many diseases from bench-to-bedside. Especially in the COVID-19 pandemic, molecular techniques and biotechnological innovation have proven to be of utmost importance for rapid developments in disease diagnostics and treatment, including DNA and RNA sequencing technology, treatment with drugs and natural products and vaccine development. The COVID-19 crisis, however, has also demonstrated the need for systemic thinking and transdisciplinarity and the limits (...) of MSM: the neglect of the bio-psycho-social systemic nature of humans and their context as the object of individual therapeutic and population-oriented interventions. COVID-19 illustrates how a medical problem requires a transdisciplinary approach in epidemiology, pathology, internal medicine, public health, environmental medicine, and socio-economic modeling. Regarding the need for conceptual integration of these different kinds of knowledge we suggest the application of general system theory (GST). This approach endorses an organism-centered view on health and disease, which according to Ludwig von Bertalanffy who was the founder of GST, we call Organismal Systems Medicine (OSM). We argue that systems science offers wider applications in the field of pathology and can contribute to an integrative systems medicine by (i) integration of evidence across functional and structural differentially scaled subsystems, (ii) conceptualization of complex multilevel systems, and (iii) suggesting mechanisms and non-linear relationships underlying the observed phenomena. We underline these points with a proposal on multi-level systems pathology including neurophysiology, endocrinology, immune system, genetics, and general metabolism. An integration of these areas is necessary to understand excess mortality rates and polypharmacological treatments. In the pandemic era this multi-level systems pathology is most important to assess potential vaccines, their effectiveness, short-, and long-time adverse effects. We further argue that these conceptual frameworks are not only valid in the COVID-19 era but also important to be integrated in a medicinal curriculum. (shrink)

This article offers a characterization of what I call multiple-models juxtaposition, a strategy for managing trade-offs among modeling desiderata. MMJ displays models of distinct phenomena to...

Large scale experiments at CERN’s Large Hadron Collider rely heavily on computer simulations, a fact that has recently caught philosophers’ attention. CSs obviously require appropriate modeling, and it is a common assumption among philosophers that the relevant models can be ordered into hierarchical structures. Focusing on LHC’s ATLAS experiment, we will establish three central results here: with some distinct modifications, individual components of ATLAS’ overall simulation infrastructure can be ordered into hierarchical structures. Hence, to a good degree of approximation, hierarchical (...) accounts remain valid at least as descriptive accounts of initial modeling steps. In order to perform the epistemic function Winsberg Model-based reasoning in scientific discovery. Kluwer Academic/plenum Publishers, New York, pp 255–269, 1999) assigns to models in simulation—generate knowledge through a sequence of skillful but non-deductive transformations—ATLAS’ simulation models have to be considered part of a network rather than a hierarchy, in turn making the associated simulation modeling messy rather than motley. Deriving knowledge-claims from this ‘mess’ requires two sources of justification: holistic validation :253–262, 2010; in Carrier M, Nordmann A Science in the context of application. Springer, Berlin, pp 115–130, 2011), and model coherence. As it turns out, the degree of model coherence sets HEP apart from other messy, simulation-intensive disciplines such as climate science, and the reasons for this are to be sought in the historical, empirical and theoretical foundations of the respective discipline. (shrink)

We explore three questions about Earth system modeling that are of both scientific and philosophical interest: What kind of understanding can be gained via complex Earth system models? How can the limits of understanding be bypassed or managed? How should the task of evaluating Earth system models be conceptualized?

Many epistemologists endorse true-belief monism, the thesis that only true beliefs are of fundamental epistemic value. However, this view faces formidable counterexamples. In response to these challenges, we alter the letter, but not the spirit, of true-belief monism. We dub the resulting view “inquisitive truth monism”, which holds that only true answers to relevant questions are of fundamental epistemic value. Which questions are relevant is a function of an inquirer’s perspective, which is characterized by his/her interests, social role, and background (...) assumptions. Using examples of several different scientific practices, we argue that inquisitive truth monism outperforms true-belief monism. (shrink)

Designing complex products involves working with uncertainties as the product, the requirements and the environment in which it is used co-evolve, and designers and external stakeholders make decisions that affect the evolving design. Rather than being held back by uncertainty, designers work, cooperate and communicate with each other notwithstanding these uncertainties by making assumptions to carry out their own tasks. To explain this, the paper proposes an adaptation of Kendall Walton’s make-believe theory to conceptualise designing as playing games of make-believe (...) by inferring what is required and imagining what is possible given the current set of assumptions and decisions, while knowing these are subject to change. What one is allowed and encouraged to imagine, conclude or propose is governed by socially agreed rules and constraints. The paper uses jet engine component design as an example to illustrate how different design teams make assumptions at the beginning of design activities and negotiate what can and cannot be done with the design. This often involves iteration – repeating activities under revised sets of assumptions. As assumptions are collectively revised, they become part of a new game of make-believe in the sense that there is social agreement that the decisions constitute part of the constraints that govern what can legitimately be inferred about the design or added to it. (shrink)

Discussion of modeling within philosophy of science has focused in how models, understood as finished products, represent the world. This approach has some issues accounting for the value of modeling in situations where there are controversies as to which should be the object of representation. In this work I show that a historical analysis of modeling complements the aforementioned representational program, since it allows us to examine processes of integration of analogies that play a role in the generation of criteria (...) of relevance, which are important for the configuration of the object of research. This, in turn, shows that there are norms in modeling practices whose historical reconstruction is relevant for their philosophical analysis. (shrink)

According to one influential view, model-building in science is primarily a matter of simplifying theoretical descriptions of real-world target systems using abstraction and idealization. This view, however, does not adequately capture all types of models. Many contemporary models in the natural and social sciences – from physics to biology to economics – stand in a more tenuous relationship with real-world target systems and have a decidedly stipulative element, in that they create, by fiat, ‘model worlds’ that operate according to some (...) set of specified rules. While such models may be motivated by an interest in actual target phenomena, their validity is not – at least not primarily – to be judged by whether they constitute an empirically adequate representation of any particular empirical system. The present paper compares and contrasts three such types of models: minimal models, toy models, and exploratory models. All three share some characteristics and thus overlap in interesting ways, yet they also exhibit significant differences. It is argued that, in all three cases, modal considerations have an important role to play: by exploring the modal structure of theories and phenomena – that is, by probing possibilities in various ways – such models deepen our understanding and help us gain knowledge not only about what there is in the world, but also about what there could be. (shrink)

The aim of this dissertation is to comprehensively study various robustness arguments proposed in the literature from Levins to Lloyd as well as the opposition offered to them and pose enquiry into the degree of epistemic virtue that they provide to the model prediction results with respect to climate science and modeling. Another critical issue that this dissertation strives to examine is that of the actual epistemic notion that is operational when scientists and philosophers appeal to robustness. In attempting to (...) explicate this idea, the discussion turns to arguments provided by Schupbach who completely rejects probabilistic independence in favour of explanatory reasoning, Stegenga and Menon who still see some value in probabilistic independence, and Winsberg who takes applies Schupbach’s to climate science, going beyond models to involve multi-modal evidence. After an exhaustive discussion on these arguments, this dissertation attempts to provide a thorough and updated notion of robustness in climate modeling and climate science. (shrink)

Model evaluation for long term climate predictions must be done on quantities other than the actual prediction, and a comprehensive uncertainty quantification is impossible. An ad hoc alternative is provided by coordinated model intercomparisons which typically use a “one model one vote” approach. The problem with such an approach is that it treats all models as independent and equally plausible. Reweighting all models of the ensemble for performance and dependence seems like an obvious way to improve on model democracy, yet (...) there are open questions on what constitutes a “good” model, how to define dependency, how to interpret robustness, and how to incorporate background knowledge. Under¬standing those issues has the potential to increase confidence in model predictions in modeling efforts outside of climate science where similar challenges exist. (shrink)

Interdisciplinarity is one of the most prominent ideas driving science and research policy today.1 It is applied widely as a conception of what particularly creative and socially relevant research processes should consist of, whether in the natural sciences, the social sciences, the humanities, or elsewhere. Its advocates, many of whom are located in current science and research administration themselves, are using ideas of interdisciplinarity to reshape university organization and research funding. For the last 40 years, researchers studying interdisciplinarity have built (...) up a substantial body of literature constructing various visions of what it should be and how to taxonomize the different forms it can... (shrink)

The replicator dynamics and Moran process are the main deterministic and stochastic models of evolutionary game theory. The models are connected by a mean-field relationship—the former describes the expected behavior of the latter. However, there are conditions under which their predictions diverge. I demonstrate that the divergence between their predictions is a function of standard techniques used in their analysis and of differences in the idealizations involved in each. My analysis reveals problems for stochastic stability analysis in a broad class (...) of games, demonstrates a novel domain of agreement between the dynamics, and indicates a broader moral for evolutionary modeling. (shrink)

Because idealizations frequently advance scientific understanding, many claim that falsehoods play an epistemic role. In this paper, we argue that these positions greatly overstate idealiza...

One can find in the literature two sets of views concerning the relationship between understanding and explanation: that one understands only if 1) one has knowledge of causes and 2) that knowledge is provided by an explanation. Taken together, these tenets characterize what I call the narrow knowledge account of understanding. While the first tenet has recently come under severe attack, the second has been more resistant to change. I argue that we have good reasons to reject it on the (...) basis of theoretical models that provide how-possibly explanations. These models, while they do not explain in the strict sense, afford understanding. In response, I propose an alternative epistemology of understanding, broad KAU, that takes cases of theoretical modelling into account. (shrink)

The structures of protein and DNA were discovered primarily by means of synthesizing component-level information about bond types, lengths, and angles, rather than analyzing X-ray diffraction photographs of these molecules. In this paper, I consider the synthetic and analytic approaches to exemplify alternative heuristics for approaching mid-twentieth-century macromolecular structure determination. I argue that the former was, all else being equal, likeliest to generate the correct structure in the shortest period of time. I begin by characterizing problem solving in these cases (...) as proceeding via the elimination of candidate structures through the successive application of component-level information and interpretations of X-ray diffraction photographs, each of which serves as a kind of constraint on structure. Then, I argue that although each kind of constraint enables the elimination of a considerable proportion of candidate structures, component-level constraints are significantly more likely to do so correctly. Thus, considering them before X-ray diffraction photographs is a better heuristic than one that reverses this order. Because the synthetic approach that resulted in the determination of the protein and DNA structures exemplifies such a heuristic, its use can help account for these discoveries. (shrink)

Margaret Morrison, (2015) Reconstructing Reality: Models, Mathematics, and Simulations. Oxford University Press, New York. -/- Scientific models, mathematical equations, and computer simulations are indispensable to scientific practice. Through the use of models, scientists are able to effectively learn about how the world works, and to discover new information. However, there is a challenge in understanding how scientists can generate knowledge from their use, stemming from the fact that models and computer simulations are necessarily incomplete representations, and partial descriptions, of their (...) target systems. In order to construct a model, one must make idealizations, approximations, and abstractions. Given these constraints in constructing models, there is a question of whether they can provide new insight into how real systems actually work. So, how is it that highly abstract models inform us about the nature of the world, and more specifically, how do they provide explanatory knowledge? In Reconstructing Reality: Models, Mathematics, and Simulations, philosopher Margaret Morrison undertakes this task of ... (shrink)

We introduce a novel point of view on the “models as mediators” framework in order to emphasize certain important epistemological questions about models in science which have so far been little investigated. To illustrate how this perspective can help answer these kinds of questions, we explore the use of simplified models in high energy physics research beyond the Standard Model. We show in detail how the construction of simplified models is grounded in the need to mitigate pressing epistemic problems concerning (...) the uncertainty inherent in the present theoretical and experimental contexts. (shrink)

In the last decade, robustness has been extensively mentioned and discussed in biology as well as in the philosophy of the life sciences. Nevertheless, from both fields, someone has affirmed that this debate has resulted in more semantic confusion than in semantic clearness. Starting from this claim, we wish to offer a sort of prima facie map of the different usages of the term. In this manner we would intend to predispose a sort of “semantic platform” which could be exploited (...) by those who wish to discuss or simply use it. We do this by starting from a core distinction between the robustness of representations, which is a philosophy of science issue, and the representations of robustness, which instead pertains to science. We illustrate our proposal with examples from biology, physics and mathematics. (shrink)

In this chapter, one considers finance at its very foundations, namely, at the place where assumptions are being made about the ways to measure the two key ingredients of finance: risk and return. It is well known that returns for a large class of assets display a number of stylized facts that cannot be squared with the traditional views of 1960s financial economics (normality and continuity assumptions, i.e. Brownian representation of market dynamics). Despite the empirical counterevidence, normality and continuity assumptions (...) were part and parcel of financial theory and practice, embedded in all financial practices and beliefs. Our aim is to build on this puzzle for extracting some clues revealing the use of one research strategy in academic community, model tinkering defined as a particular research habit. We choose to focus on one specific moment of the scientific controversies in academic finance: the ‘leptokurtic crisis’ opened by Mandelbrot in 1962. The profoundness of the crisis came from the angle of the Mandelbrot’s attack: not only he emphasized an empirical inadequacy of the Brownian representation, but also he argued for an inadequate grounding of this representation. We give some insights in this crisis and display the model tinkering strategies of the financial academic community in the 1970s and the 1980s. (shrink)

The general aim of this article is to carry out a reconstruction of the theory of Population Dynamics (DP) in Ecology, according to Castle’s (2001) general stance with regard to the semantic view of theories, but doing it within the framework of metatheoretical structuralism. Thus, we will first identify Population Dynamics’ basic theory-element: its core K(DP) – with the class of potential models, the class of models (through the identification of its fundamental law) and the class of partial potential models (...) (though leaving aside the identification of its constraints and its intertheoretical links) –, and its domain of intended applications I(DP). Then, we will establish the general guiding lines of its theory-net, developing in some detail one of its main lines of specialization – namely, that related to the so-called “continuous growing” of the considered populations –, with DP’s principal “models”, and leave developing of the other of its main lines of specialization – namely, that related to the so-called “discrete growing” of the considered populations – for a further publication. (shrink)

in a nervous system of a given species. This chapter provides a critical perspective on the role of connectomes in neuroscientific practice and asks how the connectomic approach fits into a larger context in which network thinking permeates technology, infrastructure, social life, and the economy. In the first part of this chapter, we argue that, seen from the perspective of ongoing research, the notion of connectomes as “complete descriptions” is misguided. Our argument combines Rachel Ankeny’s analysis of neuroanatomical wiring diagrams (...) as “descriptive models” with Hans-Joerg Rheinberger’s notion of “epistemic objects,” i.e., targets of research that are still partially unknown. Combining these aspects we conclude that connectomes are constitutively epistemic objects: there just is no way to turn them into permanent and complete technical standards because the possibilities to map connection properties under different modeling assumptions are potentially inexhaustible. In the second part of the chapter, we use this understanding of connectomes as constitutively epistemic objects in order to critically assess the historical and political dimensions of current neuroscientific research. We argue that connectomics shows how the notion of the “brain as a network” has become the dominant metaphor of contemporary brain research. We further point out that this metaphor shares (potentially problematic) affinities to the form of contemporary “network societies.” We close by pointing out how the relation between connectomes and networks in society could be used in a more fruitful manner. (shrink)

I introduce an account of when a rule normatively sustains a practice. My basic proposal is that a rule normatively sustains a practice when the value achieved by following the rule explains why agents continue following that rule, thus establishing and sustaining a pattern of activity. I apply this model to practices of belief management and identifies a substantive normative connection between knowledge and belief. More specifically, I proposes one special way that knowledge might set the normative standard for belief: (...) knowing is essentially the unique way of normatively sustaining cognition and, thereby, inquiry. In this respect, my proposal can be seen as one way of elaborating a “knowledge-first” normative theory. (shrink)

The topics of modeling and information come together in at least two ways. Computational modeling and simulation play an increasingly important role in science, across disciplines from mathematics through physics to economics and political science. The philosophical questions at issue are questions as to what modeling and simulation are adding, altering, or amplifying in terms of scientific information. What changes with regard to information acquisition, theoretical development, or empirical confirmation with contemporary tools of computational modeling? In this sense the title (...) of this article is read in the following way: What kind of information is modeling information? What kind of information does modeling give us? (shrink)

A central component to scientific practice is the construction and use of scientific models. Scientists believe that the success of a model justifies making claims that go beyond the model itself. However, philosophical analysis of models suggests that drawing inferences about the world from successful models is more complex. In this dissertation I develop a framework that can help disentangle the related strands of evaluation of model success, model extendibility, and the ability to draw ampliative inferences about the world from (...) models. I present and critically assess two leading accounts of model assessment, arguing that neither is sufficient to provide a complete understanding of model evaluation. I introduce a more powerful framework incorporating elements of the two views, which can help answer these three questions: What is the target of evaluation in model assessment? How does that evaluation proceed? What licenses us in making inferences about the real world, based on the evaluation of our models as successful? The framework identifies two distinct targets of model evaluation: representational similarity between the model and target system, and the adequacy of the model as a tool to answer questions. Both assessments must be relativized to a purpose, of which there are three general kinds: descriptive, predictive, and explanatory. These purposes differ in the way they inform the similarity relation, which is relevant for the similarity assessment, and the output they produce, which is relevant for the adequacy assessment. Any model can be assessed relative to any purpose, however a model encodes certain decisions made during the model’s construction, which impact its ability to be applied to a new purpose or new domain. My framework shows that extending a model, and drawing inferences from it, depends on its representational similarity. I apply this framework to several examples taken from astrophysics showing in detail how it can help illuminate the structure of the models, as well as make the justification for inferences made from them clear. The final chapter is a detailed analysis of a contemporary debate surrounding the use of models in astrophysics, between proponents of MOND and the standard ΛCDM model. (shrink)

Over the course of the twentieth century, hydraulic engineering has come to rely primarily on the use of computational models. Disco and van den Ende hint towards the reasons for widespread adoption of computational models by pointing out that such models fulfill a crucial role as management tools in Dutch water management, and meet a more general desire to quantify water-related phenomena. The successful application of computational models implies blackboxing : “[w]hen a machine runs efficiently … one need focus only (...) on its inputs and outputs and not on its internal complexity. Thus, paradoxically, the more science and technology succeed, the more opaque and obscure they become”.. (shrink)

We make the case that the Prisoner’s Dilemma, notwithstanding its fame and the quantity of intellectual resources devoted to it, has largely failed to explain any phenomena of social scientific or biological interest. In the heart of the paper we examine in detail a famous purported example of Prisoner’s Dilemma empirical success, namely Axelrod’s analysis of WWI trench warfare, and argue that this success is greatly overstated. Further, we explain why this negative verdict is likely true generally and not just (...) in our case study. We also address some possible defenses of the Prisoner’s Dilemma. (shrink)

This chapter elaborates and develops the thesis originally put forward by Mary Morgan (2005) that some mathematical models may surprise us, but that none of them can completely confound us, i.e. let us unable to produce an ex post theoretical understanding of the outcome of the model calculations. This chapter intends to object and demonstrate that what is certainly true of classical mathematical models is however not true of pluri-formalized simulations with multiple axiomatic bases. This chapter thus proposes to show (...) that - and why - some of these computational simulations that are now booming in the sciences not only surprise us but also confound us. To do so, it shows too that it is needed to elaborate and articulate with some new precision the concept of weak emergence initially due, for its part, to Mark A. Bedau (1997). (shrink)

The philosophical conception of mechanistic explanation is grounded on a limited number of canonical examples. These examples provide an overly narrow view of contemporary scientific practice, because they do not reflect the extent to which the heuristic strategies and descriptive practices that contribute to mechanistic explanation have evolved beyond the well-known methods of decomposition, localization, and pictorial representation. Recent examples from evolutionary robotics and network approaches to biology and neuroscience demonstrate the increasingly important role played by computer simulations and mathematical (...) representations in the epistemic practices of mechanism discovery and mechanism description. These examples also indicate that the scope of mechanistic explanation must be re-examined: With new and increasingly powerful methods of discovery and description comes the possibility of describing mechanisms far more complex than traditionally assumed. (shrink)

Assessment of error and uncertainty is a vital component of both natural and social science. This edited volume presents case studies of research practices across a wide spectrum of scientific fields. It compares methodologies and presents the ingredients needed for an overarching framework applicable to all.

One of the most conspicuous features of contemporary modeling practices is the dissemination of mathematical and computational methods across disciplinary boundaries. We study this process through two applications of the Ising model: the Sherrington-Kirkpatrick model of spin glasses and the Hopfield model of associative memory. The Hopfield model successfully transferred some basic ideas and mathematical methods originally developed within the study of magnetic systems to the field of neuroscience. As an analytical resource we use Paul Humphreys's discussion of computational and (...) theoretical templates. We argue that model templates are crucial for the intra- and interdisciplinary theoretical transfer. A model template is an abstract conceptual idea associated with particular mathematical forms and computational methods. (shrink)

I argue that an adequate understanding of the practice of constructing models in physics requires a distinction between two strategies that are commonly both labeled ‘idealization’. The formal characteristic of both methods is to let a parameter in the equations for a target system go to zero. But the discussion of examples from various applications of perturbation theory shows that there is in general a difference with respect to the aims such limiting procedures are supposed to serve; and with different (...) aims comes the need to characterize the means (the interpretation of the limits) differently. I therefore suggest that we distinguish ‘idealizations’ from ‘perspectives’ or perspectival representations. (shrink)

Modern science is, to a large extent, a model-building activity. But how are models contructed? How are they related to theories and data? How do they explain complex scientific phenomena, and which role do computer simulations play here? These questions have kept philosophers of science busy for many years, and much work has been done to identify modeling as the central activity of theoretical science. At the same time, these questions have been addressed by methodologically-minded scientists, albeit from a different (...) point of view. While philosophers typically have an eye on general aspects of scientific modeling, scientists typically take their own science as the starting point and are often more concerned with specific methodological problems. There is, however, also much common ground in middle, where philosophers and scientists can engage in a productive dialogue, as the present volume demonstrates. To do so, the editors of this volume have invited eight leading scientists from cosmology, climate science, social science, chemical engeneering and neuroscience to reflect upon their modeling work, and eight philosophers of science to provide a commentary. (shrink)

Humans continuously delegate and distribute cognitive functions to the environment to lessen their limits. They build models, representations, and other various mediating structures, that are thought to be good to think. The case of scientific innovation is particularly important: the main aim of this paper is to revise and criticize the concept of scientific innovation, reframing it in what I will call an eco-epistemic perspective, taking advantage of recent results coming from the area of distributed cognition and abductive cognition . (...) Taking advantage of this eco-cognitive perspective the article outlines how innovative scientific modeling activity can be better described taking advantage of the concept of “epistemic warfare”, which sees scientific enterprise as a complicated struggle for rational knowledge in which it is crucial to distinguish epistemic from non epistemic weapons. (shrink)

There are different kinds of uncertainty. I outline some of the various ways that uncertainty enters science, focusing on uncertainty in climate science and weather prediction. I then show how we cope with some of these sources of error through sophisticated modelling techniques. I show how we maintain confidence in the face of error.

This is the introduction to the special issue of the Spanish journal Ágora-Papeles de Filosofía (31/2, 2012) devoted to new Ibero-American contributions to metatheoretical structuralism.

When game theory was introduced to biology, the components of classic game theory models were replaced with elements more befitting evolutionary phenomena. The actions of intelligent agents are replaced by phenotypic traits; utility is replaced by fitness; rational deliberation is replaced by natural selection. In this paper, I argue that this classic conception of comprehensive reapplication is misleading, for it overemphasizes the discontinuity between human behavior and evolved traits. Explicitly considering the representational roles of evolutionary game theory brings to attention (...) neglected areas of overlap, as well as a range of evolutionary possibilities that are often overlooked. The clarifications this analysis provides are well-illustrated by—and particularly valuable for—game theoretic treatments of the evolution of social behavior. (shrink)

Cet article revient sur la pratique scientifique et les thèses épistémologiques de Jean-Marie Legay concernant les modèles, les simulations et les systèmes complexes. Il montre qu'il y a une cohérence entre sa thèse anti-représentationnaliste concernant les modèles et les simulations et sa caractérisation même des systèmes complexes : une simulation informatique, seule, n'est pas une expérience au sens fort car, en l'isolant, on perd la dimension complexe de toute entreprise d'expérimentation scientifique dès lors qu'il y manque le modélisateur, le terrain (...) d'inspiration originelle ainsi que les objectifs de simulation, qui en interagissant à eux trois forment un système complexe. Vouloir prendre une simulation séparée de son modélisateur et de son ancrage empirique originel pour une expérience au sens fort, vouloir la considérer à elle seule comme une captation intégrale, dans la machine, de la complexité des systèmes étudiés par ailleurs en sciences de la vie et de l'environnement, ce serait croire que l'aventure scientifique elle-même n'aurait plus désormais, avec l'essor contemporain de l'informatique de modélisation, à être considérée elle-même comme complexe. C'est bien cette seule idée qui lui paraissait déraisonnable. (shrink)

Cet ouvrage très pédagogique informe les étudiants sur les méthodes quantitatives les plus classiques comme les plus récentes en sciences sociales, et notamment sur les différentes pratiques de modélisation et de simulation informatique des systèmes sociaux (sciences sociales computationnelles ou modèles informatiques).