Results for ' network topology'

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  1.  39
    Protein network topology metric conservation: from yeast to human.Gil Alterovitz, Michael Xiang, Isaac S. Kohane & Marco F. Ramoni - 2005 - In Alan F. Blackwell & David MacKay (eds.), Power. Cambridge University Press. pp. 1-5.
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  2.  11
    Network topology and dispersive kinks observed by high-resolution photoemission spectroscopy in cuprate high-temperature superconductors.J. C. Phillips - 2003 - Philosophical Magazine 83 (16):1949-1962.
    Electron-phonon interactions appear to explain some of, but not all, the features of the dispersive kinks in recently observed by angle-resolved photoemission spectroscopy. The remaining anomalies have led to suggestions that magnon, and not phonon, interactions are involved. If one abandons the effective-medium approximation and replaces it with dopant-centred filamentary percolation, a picture emerges that is consistent not only with the photoemission experiments but also with tunnelling, infrared and neutron scattering data.
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  3.  13
    Network topology and subgap resonances observed by Fourier transform scanning tunnelling microscopy of cuprate high-temperature superconductors.J. C. Phillips - 2003 - Philosophical Magazine 83 (28):3267-3281.
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  4.  21
    Frequency-specific network topologies in the resting human brain.Shuntaro Sasai, Fumitaka Homae, Hama Watanabe, Akihiro T. Sasaki, Hiroki C. Tanabe, Norihiro Sadato & Gentaro Taga - 2014 - Frontiers in Human Neuroscience 8.
  5.  33
    Complexities in Financial Network Topological Dynamics: Modeling of Emerging and Developed Stock Markets.Yong Tang, Jason Jie Xiong, Zi-Yang Jia & Yi-Cheng Zhang - 2018 - Complexity 2018:1-31.
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  6.  17
    From Expert to Elite? — Research on Top Archer’s EEG Network Topology.Feng Gu, Anmin Gong, Yi Qu, Aiyong Bao, Jin Wu, Changhao Jiang & Yunfa Fu - 2022 - Frontiers in Human Neuroscience 16.
    It is not only difficult to be a sports expert but also difficult to grow from a sports expert to a sports elite. Professional athletes are often concerned about the differences between an expert and an elite and how to eventually become an elite athlete. To explore the differences in brain neural mechanism between experts and elites in the process of motor behavior and reveal the internal connection between motor performance and brain activity, we collected and analyzed the electroencephalography findings (...)
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  7.  17
    The Navigability of Strong Ties: Small Worlds, Tie Strength and Network Topology.Michael Houseman & R. White Douglas - 2002 - Complexity 8 (1):72-81.
    We examine data on and models of small world properties and parameters of social networks. Our focus, on tie-strength, multilevel networks and searchability in strong-tie social networks, allows us to extend some of the questions and findings of recent research and the fit of small world models to sociological and anthropological data on human communities. We offer a 'navigability of strong ties' hypothesis about network topologies tested with data from kinship systems, but potentially applicable to corporate cultures and business (...)
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  8.  67
    Social Optimization in the Presence of Cognitive Local Optima: Effects of Social Network Topology and Interaction Mode.James Kennedy - 2009 - Topics in Cognitive Science 1 (3):498-522.
    The combined tendency for positive self‐presentation and mimicry or social learning results in the capability of a population of simulated individuals to optimize their cognitive structures. A population of parallel constraint satisfaction networks was created, with globally and locally optimal activation patterns. Individuals started with random activations and interacted to find optimal vectors. Two social network topologies were tested, as well as two modes of interaction; results indicated that the ability to optimize activation vectors depends on the social (...) configuration and whether individuals are influenced by their best neighbor or are attracted to a neighborhood centroid. Simulated individuals are able to find suitable patterns of belief or attitude with very little internal information processing, using social interaction. (shrink)
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  9.  6
    Effects of Variations in Neural Network Topology and Output Averaging on the Discrimination of Mental Tasks from Spontaneous Electroencephalogram.Charles W. Anderson - 1997 - Journal of Intelligent Systems 7 (1-2):165-190.
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  10.  76
    The navigability of strong ties: Small worlds, tie strength, and network topology.Douglas R. White & Michael Houseman - 2002 - Complexity 8 (1):72-81.
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  11.  9
    Multiscale Tail Risk Connectedness of Global Stock Markets: A LASSO-Based Network Topology Approach.Yuting Du, Xu Zhang, Zhijing Ding & Xian Yang - 2022 - Complexity 2022:1-17.
    Due to the advent of deglobalization and regional integration, this article aims to adopt LASSO-based network connectedness to estimate the multiscale tail risk spillover effects of global stock markets. The results show that tail risk varies across frequencies and shocks. In static analysis, the risk is centered mostly on the developed European and North American markets at a low frequency, and regionalization is imposed on the moderate frequency. Moreover, emerging markets could be sources of risk spillover, especially at the (...)
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  12.  14
    Age-Related Alterations in Electroencephalography Connectivity and Network Topology During n-Back Working Memory Task.Fengzhen Hou, Cong Liu, Zhinan Yu, Xiaodong Xu, Junying Zhang, Chung-Kang Peng, Chunyong Wu & Albert Yang - 2018 - Frontiers in Human Neuroscience 12.
  13.  32
    Aberrant Topological Patterns of Structural Cortical Networks in Psychogenic Erectile Dysfunction.Lu Zhao, Min Guan, Xiaobo Zhu, Sherif Karama, Budhachandra Khundrakpam, Meiyun Wang, Minghao Dong, Wei Qin, Jie Tian, Alan C. Evans & Dapeng Shi - 2015 - Frontiers in Human Neuroscience 9:166843.
    Male sexual arousal (SA) has been known as a multidimensional experience involving closely interrelated and coordinated neurobehavioral components that rely on widespread brain regions. Recent functional neuroimaging studies have shown relation between abnormal/altered dynamics in these circuits and male sexual dysfunction. However, alterations in the topological1 organization of structural brain networks in male sexual dysfunction are still unclear. Here, we used graph theory2 to investigate the topological properties of large-scale structural brain networks, which were constructed using inter-regional correlations of cortical (...)
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  14. Mechanistic and topological explanations in medicine: the case of medical genetics and network medicine.Marie Darrason - 2018 - Synthese 195 (1):147-173.
    Medical explanations have often been thought on the model of biological ones and are frequently defined as mechanistic explanations of a biological dysfunction. In this paper, I argue that topological explanations, which have been described in ecology or in cognitive sciences, can also be found in medicine and I discuss the relationships between mechanistic and topological explanations in medicine, through the example of network medicine and medical genetics. Network medicine is a recent discipline that relies on the analysis (...)
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  15. How and when are topological explanations complete mechanistic explanations? The case of multilayer network models.Beate Krickel, Leon de Bruin & Linda Douw - 2023 - Synthese 202 (1):1-21.
    The relationship between topological explanation and mechanistic explanation is unclear. Most philosophers agree that at least some topological explanations are mechanistic explanations. The crucial question is how to make sense of this claim. Zednik (Philos Psychol 32(1):23–51, 2019) argues that topological explanations are mechanistic if they (i) describe mechanism sketches that (ii) pick out organizational properties of mechanisms. While we agree with Zednik’s conclusion, we critically discuss Zednik’s account and show that it fails as a general account of how and (...)
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  16.  20
    Topological Influence-Aware Recommendation on Social Networks.Zhaoyi Li, Fei Xiong, Ximeng Wang, Hongshu Chen & Xi Xiong - 2019 - Complexity 2019:1-12.
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  17.  13
    Network analysis using a novel highly discriminating topological index.Mircea V. Diudea, Aleksandar Ilić, Kurt Varmuza & Matthias Dehmer - 2011 - Complexity 16 (6):32-39.
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  18.  6
    Topology Optimization of Interactive Visual Communication Networks Based on the Non-Line-of-Sight Congestion Control Algorithm.Boya Liu & Xiaobo Zhou - 2020 - Complexity 2020:1-11.
    In this paper, an in-depth study of interactive visual communication of network topology through non-line-of-sight congestion control algorithms is conducted to address the real-time routing problem of adapting to dynamic topologies, and a delay-constrained stochastic routing algorithm is proposed to enable packets to reach GB within the delay threshold in the absence of end-to-end delay information while improving network throughput and reducing network resource consumption. The algorithm requires each sending node to select an available relay set (...)
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  19.  22
    Topological Modification of Brain Networks Organization in Children With High Intelligence Quotient: A Resting-State fMRI Study.Ilaria Suprano, Chantal Delon-Martin, Gabriel Kocevar, Claudio Stamile, Salem Hannoun, Sophie Achard, Amanpreet Badhwar, Pierre Fourneret, Olivier Revol, Fanny Nusbaum & Dominique Sappey-Marinier - 2019 - Frontiers in Human Neuroscience 13:455520.
    The idea that intelligence is embedded not only in a single brain network, but instead in a complex, well-optimized system of complementary networks, has led to the development of whole brain network analysis. Using graph theory to analyze resting-state functional MRI data, we investigated the brain graph networks (or brain networks) of high intelligence quotient (HIQ) children. To this end, we computed the “hub disruption index κ”, an index sensitive to graph network modifications. We found significant topological (...)
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  20.  13
    Topology optimization of computer communication network based on improved genetic algorithm.Kayhan Zrar Ghafoor, Jilei Zhang, Yuhong Fan & Hua Ai - 2022 - Journal of Intelligent Systems 31 (1):651-659.
    The topology optimization of computer communication network is studied based on improved genetic algorithm, a network optimization design model based on the establishment of network reliability maximization under given cost constraints, and the corresponding improved GA is proposed. In this method, the corresponding computer communication network cost model and computer communication network reliability model are established through a specific project, and the genetic intelligence algorithm is used to solve the cost model and computer communication (...)
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  21.  8
    Topological Structure of Manufacturing Industry Supply Chain Networks.Supun S. Perera, Michael G. H. Bell, Mahendrarajah Piraveenan, Dharshana Kasthurirathna & Mamata Parhi - 2018 - Complexity 2018:1-23.
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  22.  5
    Topological Aspects of Molecular Networks: Crystal Cubic Carbons.Muhammad Javaid, Aqsa Sattar & Ebenezer Bonyah - 2022 - Complexity 2022:1-14.
    Theory of networks serves as a mathematical foundation for the construction and modeling of chemical structures and complicated networks. In particular, chemical networking theory has a wide range of utilizations in the study of chemical structures, where examination and manipulation of chemical structural information are made feasible by utilizing the numerical graph invariants. A network invariant or a topological index is a numerical measure of a chemical compound which is capable to describe the chemical structural properties such as melting (...)
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  23.  6
    Topological and networked visibility: Politics of seeing in the digital age.Michele Martini - 2019 - Semiotica 2019 (231):259-277.
    Today, the convergence of video-based Internet Communication Technologies is challenging centralized control over cultural topologies. Accordingly, this paper proposes a theoretical prism for the analysis of the sociopolitical impact of online audio-visual communication. More precisely, this study discusses how topological visibility and networked visibility interact in today’s digital landscape. To this aim, four examples divided into two clusters will be discussed. The first cluster will describe the functioning of topological visibility, while the second cluster will illustrate how technology-enhanced mediability may (...)
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  24.  8
    Topology-Aware Bus Routing in Complex Networks of Very-Large-Scale Integration with Nonuniform Track Configurations and Obstacles.Ziran Zhu, Zhipeng Huang, Jianli Chen & Longkun Guo - 2021 - Complexity 2021:1-12.
    As one of the most important routing problems in the complex network within a very-large-scale integration circuit, bus routing has become much more challenging when witnessing the advanced technology node enters the deep nanometer era because all bus bits need to be routed with the same routing topology in the context. In particular, the nonuniform routing track configuration and obstacles bring the largest difficulty for maintaining the same topology for all bus bits. In this paper, we first (...)
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  25.  24
    Different Topological Properties of EEG-Derived Networks Describe Working Memory Phases as Revealed by Graph Theoretical Analysis.Jlenia Toppi, Laura Astolfi, Monica Risetti, Alessandra Anzolin, Silvia E. Kober, Guilherme Wood & Donatella Mattia - 2018 - Frontiers in Human Neuroscience 11.
  26.  7
    Vertex-Edge-Degree-Based Topological Properties for Hex-Derived Networks.Ali Ahmad & Muhammad Imran - 2022 - Complexity 2022:1-13.
    A topological index can be focused on uprising of a chemical structure into a real number. The degree-based topological indices have an active place among all topological indices. These topological descriptors intentionally associate certain physicochemical assets of the corresponding chemical compounds. Graph theory plays a very useful role in such type of research directions. The hex-derived networks have vast applications in computer science, physical sciences, and medical science, and these networks are constructed by hexagonal mesh networks. In this paper, we (...)
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  27.  8
    Corrigendum: Topological Modification of Brain Networks Organization in Children With High Intelligence Quotient: A Resting-State fMRI Study.Ilaria Suprano, Chantal Delon-Martin, Gabriel Kocevar, Claudio Stamile, Salem Hannoun, Sophie Achard, Amanpreet Badhwar, Pierre Fourneret, Olivier Revol, Fanny Nusbaum & Dominique Sappey-Marinier - 2020 - Frontiers in Human Neuroscience 13.
  28.  10
    Altered Topological Properties of Brain Structural Covariance Networks in Patients With Cervical Spondylotic Myelopathy.Cuili Kuang, Yunfei Zha, Changsheng Liu & Jun Chen - 2020 - Frontiers in Human Neuroscience 14.
  29.  12
    Statistical topology of radial networks: a case study of tree leaves.Rak-Kyeong Seong, Carolyn M. Salafia & Dimitri D. Vvedensky - 2012 - Philosophical Magazine 92 (1-3):230-245.
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  30.  6
    On Topological Indices for Complex Indium Phosphate Network and Their Applications.Wang Hui, Lubna Sherin, Sana Javed, Sadia Khalid, Waqar Asghar & Samuel Asefa Fufa - 2022 - Complexity 2022:1-17.
    A chemical compound in the form of graph terminology is known as a chemical graph. Molecules are usually represented as vertices, while their bonding or interaction is shown by edges in a molecular graph. In this paper, we computed various connectivity indices based on degrees of vertices of a chemical graph of indium phosphide. Afterward, we found the physical measures like entropy and heat of formation of InP. Then, we fitted curves between different indices and the thermodynamical properties, namely, heat (...)
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  31.  13
    Topology Control and Medium Access Control (MAC) Protocol for Wireless Sensor Networks (WSNs) in Cyber-Physical System.Ang Li, Chen Zhang, Baoyu Zheng & Lei Li - 2021 - Complexity 2021:1-12.
    The system reachability set is calculated by covering all possible behaviours of the system through a finite number of simulation steps to ensure that the system trajectory stays within a set safety region. In this paper, the theory of the game method is applied to the design of the controller, a very small controller is designed, and good control results are obtained by simulation. The system gradually shows a divergent trend and cannot achieve stable control. A multihop channel reservation Medium (...)
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  32.  16
    Modeling networked systems using the topologically distributed bounded rationality framework.Dharshana Kasthurirathna, Mahendra Piraveenan & Shahadat Uddin - 2016 - Complexity 21 (S2):123-137.
  33.  6
    Analysis on topological alterations of functional brain networks after acute alcohol intake using resting-state functional magnetic resonance imaging and graph theory.Gengbiao Zhang, Hongkun Liu, Hongyi Zheng, Ni Li, Lingmei Kong & Wenbin Zheng - 2022 - Frontiers in Human Neuroscience 16:985986.
    AimsAlcohol consumption could lead to a series of health problems and social issues. In the current study, we investigated the resting-state functional brain networks of healthy volunteers before and after drinking through graph-theory analysis, aiming to ascertain the effects of acute alcohol intake on topology and information processing mode of the functional brain networks.Materials and methodsThirty-three healthy volunteers were enrolled in this experiment. Each volunteer accepted alcohol breathalyzer tests followed by resting-state magnetic resonance imaging at three time points: before (...)
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  34.  12
    Computing Some Degree-Based Topological Indices of Honeycomb Networks.Lili Gu, Shamaila Yousaf, Akhlaq Ahmad Bhatti, Peng Xu & Adnan Aslam - 2022 - Complexity 2022:1-13.
    A topological index is a numeric quantity related with the chemical composition claiming to correlate the chemical structure with different chemical properties. Topological indices serve to predict physicochemical properties of chemical substance. Among different topological indices, degree-based topological indices would be helpful in investigating the anti-inflammatory activities of certain chemical networks. In the current study, we determine the neighborhood second Zagreb index and the first extended first-order connectivity index for oxide network O X n, silicate network S L (...)
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  35.  7
    Analysis of Topological Aspects for Metal-Insulator Transition Superlattice Network.Rongbing Huang, M. H. Muhammad, M. K. Siddiqui, S. Khalid, S. Manzoor & E. Bashier - 2022 - Complexity 2022:1-11.
    In this research work, we have explored the physical and topological properties of the crystal structure of metal-insulator transition superlattice. In recent times, two-dimensional substantial have enamored comprehensive considerations owing to their novel ophthalmic and mechanical properties for anticipated employment. Recently, some researchers put their interest in modifying this material into useful forms in human life. Also, Metal-Insulator Transition Superlattice is useful in form of a thin film to utilize as two-dimensional transition metal dichalcogenides. Moreover, we have defined the computed-based (...)
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  36. Topological Explanations: An Opinionated Appraisal.Daniel Kostić - 2022 - In I. Lawler, E. Shech & K. Khalifa (eds.), Scientific Understanding and Representation: Modeling in the Physical Sciences. Routledge. pp. 96-115.
    This chapter provides a systematic overview of topological explanations in the philosophy of science literature. It does so by presenting an account of topological explanation that I (Kostić and Khalifa 2021; Kostić 2020a; 2020b; 2018) have developed in other publications and then comparing this account to other accounts of topological explanation. Finally, this appraisal is opinionated because it highlights some problems in alternative accounts of topological explanations, and also it outlines responses to some of the main criticisms raised by the (...)
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  37.  8
    Distance-Based Topological Descriptors on Ternary Hypertree Networks.Yun Yu, D. Antony Xavier, Eddith Sarah Varghese, Deepa Mathew, Muhammad Kamran Siddiqui & Samuel Asefa Fufa - 2022 - Complexity 2022:1-9.
    Topological indices are numeric parameters which portray the topology of a subatomic structure. In QSAR/QSPR analysis, topological descriptors play a vital role to examine the topology of a network. An interconnection network is a structure whose components are connected physically according to some pattern. In this paper, an interconnection network, ternary hypertree, which is a structural combination of complete ternary tree and hypertree, is introduced. We have evaluated the topological descriptors grounded on the distances for (...)
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  38.  52
    When metabolism meets topology: Reconciling metabolite and reaction networks.Raul Montañez, Miguel Angel Medina, Ricard V. Solé & Carlos Rodríguez-Caso - 2010 - Bioessays 32 (3):246-256.
    The search for a systems‐level picture of metabolism as a web of molecular interactions provides a paradigmatic example of how the methods used to characterize a system can bias the interpretation of its functional meaning. Metabolic maps have been analyzed using novel techniques from network theory, revealing some non‐trivial, functionally relevant properties. These include a small‐world structure and hierarchical modularity. However, as discussed here, some of these properties might actually result from an inappropriate way of defining network interactions. (...)
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  39.  4
    A Study of Hexagon Star Network with Vertex-Edge-Based Topological Descriptors.Eshrag A. Refaee & Ali Ahmad - 2021 - Complexity 2021:1-7.
    There are many network topology designs that have emerged to fulfill the growing need for networks to provide a robust platform for a wide range of applications like running businesses and managing emergencies. Amongst the most famous network topology designs are star network, mesh network, hexagonal network, honeycomb network, etc. In a star network, a central computer is linked with various terminals and other computers over point-to-point lines. The other computers and (...)
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  40.  33
    Beyond anarchy: Self‐organized topology for peer‐to‐peer networks.Fabrice Saffre & Robert Ghanea-Hercock - 2003 - Complexity 9 (2):49-53.
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  41.  47
    Static versus dynamic topology of complex communications network during organizational crisis.Shahadat Uddin, Liaquat Hossain, Shahriar Tanvir Murshed & John W. Crawford - 2011 - Complexity 16 (5):27-36.
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  42.  14
    A Century of Topological Coevolution of Complex Infrastructure Networks in an Alpine City.Jonatan Zischg, Christopher Klinkhamer, Xianyuan Zhan, P. Suresh C. Rao & Robert Sitzenfrei - 2019 - Complexity 2019:1-16.
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  43.  47
    An algebraic topological method for multimodal brain networks comparisons.Tiago Simas, Mario Chavez, Pablo R. Rodriguez & Albert Diaz-Guilera - 2015 - Frontiers in Psychology 6.
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  44.  57
    A Multi-Granularity Backbone Network Extraction Method Based on the Topology Potential.Hanning Yuan, Yanni Han, Ning Cai & Wei An - 2018 - Complexity 2018:1-8.
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  45.  10
    Characterizing the topology of attentional and sensory network communication.Bell Peter & Shine James - 2015 - Frontiers in Human Neuroscience 9.
  46.  12
    Exploring the topology of network convergence: integration and segregation in the human connectome.Bell Peter & Mattingley Jason - 2015 - Frontiers in Human Neuroscience 9.
  47. Beyond anarchy: Self-organized topology for peer-to-peer networks.S. Fabrice & R. Ghanea-Hercock - 2004 - Complexity 9 (2):49-53.
  48.  27
    Connectomic Insights into Topologically Centralized Network Edges and Relevant Motifs in the Human Brain.Mingrui Xia, Qixiang Lin, Yanchao Bi & Yong He - 2016 - Frontiers in Human Neuroscience 10.
  49.  12
    Wrestling with pleiotropy: Genomic and topological analysis of the yeast gene expression network.David E. Featherstone & Kendal Broadie - 2002 - Bioessays 24 (3):267-274.
    The vast majority (> 95%) of single-gene mutations in yeast affect not only the expression of the mutant gene, but also the expression of many other genes. These data suggest the presence of a previously uncharacterized ‘gene expression network’—a set of interactions between genes which dictate gene expression in the native cell environment. Here, we quantitatively analyze the gene expression network revealed by microarray expression data from 273 different yeast gene deletion mutants.(1) We find that gene expression interactions (...)
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  50. The topological realization.Daniel Kostić - 2018 - Synthese (1).
    In this paper, I argue that the newly developed network approach in neuroscience and biology provides a basis for formulating a unique type of realization, which I call topological realization. Some of its features and its relation to one of the dominant paradigms of realization and explanation in sciences, i.e. the mechanistic one, are already being discussed in the literature. But the detailed features of topological realization, its explanatory power and its relation to another prominent view of realization, namely (...)
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