Abstract

We build a topological model, based on intuitionistic logic, for multi-agent biological systems (such as _Physarum polycephalum_, bacterial colonies or any other swarm), reacting to external nourishment stimuli. Our construction follows the topological description of brain activity, where particles (neurons) are activated by an external environment, represented by a topological space _X_ with an open cover \(\{U_i:i\in I\}\). The brain builds the model of this external space via the nerve (trace) of a topological space _X_. Here the body of _Physarum polycephalum_ or a swarm made of networks of tubular structures represents a nerve (trace) of _X_ also which means that _Physarum polycephalum_ or a swarm gains orientation in the space of external stimuli even in the absence of any neural system. The logic of living organisms is based on open subsets of _X_ and thus can be represented by Heyting algebra (i.e. intuitionistically). We also consider the generalisation of the nerve construction to a categorical context, where the category is determined by the network structures of multi-agent biological system. This model can be generalised up to simulating the behaviour of any swarm by means of intuitionistic logic.