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Jonathan Bard [20]Jonathan B. L. Bard [6]Jonathan B. Bard [2]
  1.  98
    The OBO Foundry: Coordinated evolution of ontologies to support biomedical data integration.Barry Smith, Michael Ashburner, Cornelius Rosse, Jonathan Bard, William Bug, Werner Ceusters, Louis J. Goldberg, Karen Eilbeck, Amelia Ireland, Christopher J. Mungall, Neocles Leontis, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Nigam Shah, Patricia L. Whetzel & Suzanna Lewis - 2007 - Nature Biotechnology 25 (11):1251-1255.
    The value of any kind of data is greatly enhanced when it exists in a form that allows it to be integrated with other data. One approach to integration is through the annotation of multiple bodies of data using common controlled vocabularies or ‘ontologies’. Unfortunately, the very success of this approach has led to a proliferation of ontologies which itself creates obstacles to integration. The Open Biomedical Ontologies (OBO) consortium has set in train a strategy to overcome this problem. Existing (...)
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  2.  55
    Waddington’s Legacy to Developmental and Theoretical Biology.Jonathan B. L. Bard - 2008 - Biological Theory 3 (3):188-197.
    Conrad Hal Waddington was a British developmental biologist who mainly worked in Cambridge and Edinburgh, but spent the late 1930s with Morgan in California learning about Drosophila. He was the first person to realize that development depended on the then unknown activities of genes, and he needed an appropriate model organism. His major experimental contributions were to show how mutation analysis could be used to investigate developmental mechanisms in Drosophila, and to explore how developmental mutation could drive evolution, his other (...)
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  3.  30
    Ontologies: Formalising biological knowledge for bioinformatics.Jonathan Bard - 2003 - Bioessays 25 (5):501-506.
    An ontology is a domain of knowledge structured through formal rules so that it can be interpreted and used by computers. Ontologies are becoming increasingly important in bioinformatics because they can be linked to the information in databases and their knowledge then used to query the databases. Typical examples in current use are the Gene Ontology, which incorporates much of our knowledge about gene products, and ontologies of developmental anatomy, which, for example, facilitate tissue‐based queries to gene expression databases both (...)
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  4.  29
    A systems biology view of evolutionary genetics.Jonathan Bard - 2010 - Bioessays 32 (7):559-563.
  5.  38
    C.H. Waddington’s differences with the creators of the modern evolutionary synthesis: a tale of two genes.Jonathan B. L. Bard - 2017 - History and Philosophy of the Life Sciences 39 (3):18.
    In 2011, Peterson suggested that the main reason why C.H. Waddington was essentially ignored by the framers of the modern evolutionary synthesis in the 1950s was because they were Cartesian reductionists and mathematical population geneticists while he was a Whiteheadian organicist and experimental geneticist who worked with Drosophila. This paper suggests a further reason that can only be seen now. The former defined genes and their alleles by their selectable phenotypes, essentially the Mendelian view, while Waddington defined a gene through (...)
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  6.  27
    Growth and death in the developing mammalian kidney: signals, receptors and conversations.Jonathan B. L. Bard - 2002 - Bioessays 24 (1):72-82.
    Because the kidney (metanephros) starts to function before completing development, its patterning and morphogenesis need to be closely integrated with its growth. This is achieved by blast cells at the kidney periphery generating new nephrons that link up to the extending collecting‐duct arborisation, while earlier‐formed and more internal nephrons are maturing and beginning to filter serum. This pattern of development requires that cell division and apoptosis be co‐ordinated in the various kidney compartments (collecting‐ducts, blast cells, metanephric mesenchyme, nephrons and vascular (...)
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  7.  21
    Kuhnian revolutions in developmental biology.Jonathan Bard - 1996 - Bioessays 18 (11):937-937.
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  8.  15
    Traction and the formation of mesenchymal condensations in vivo.Jonathan B. L. Bard - 1990 - Bioessays 12 (8):389-395.
    Although the segregation of mesenchyme into distinct aggregates is the first step in the development of a range of tissues that includes bones, somites, feathers and nephrons, we still know very little about the mechanisms by which this happens. There are two obvious types of explanation: first, that there are global pre‐patterns within the mesenchyme whose molecular expression leads to tissue fragmentation and, second, that the condensations arise spontaneously through the local morphogenetic abilities of the cells. The only known mechanism (...)
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  9.  17
    What's New? A real mouse for your computer.Richard Baldock, Jonathan Bard, Matt Kaufman & Duncan Davidson - 1992 - Bioessays 14 (7):501-502.
  10.  1
    Bioinformatics for beginners.Jonathan Bard - 2002 - Bioessays 24 (9):867-868.
  11.  13
    A new role for the stromal cells in kidney development.Jonathan Bard - 1996 - Bioessays 18 (9):705-707.
    New observations by Hatini et al.(1) on the ‘winged helix’ transcription factor BF‐2 will make us change our views about kiney development. This gene is only expressed in stromal cells associated with the kidney medulla and cortex, but the BF‐2 knockout has unexpected abnormalities. Although the stromal cells appear normal, the kidney is small, the ducts have limited branching and, instead of the many normal nephrogenic aggregates, there are relatively few large mesenchymal aggregates that fail to differentiate. The stromal cells (...)
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  12.  27
    Bioinformatics for beginners.Jonathan Bard - 2002 - Bioessays 24 (9):867-868.
  13.  29
    Do universities do too much research?Jonathan B. L. Bard - 1996 - Bioessays 18 (1):1-2.
  14.  10
    Exploring development.Jonathan B. Bard - 1998 - Bioessays 20 (7):598-599.
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  15.  4
    Exploring development.Jonathan B. Bard - 1998 - Bioessays 20 (7):598-599.
  16.  13
    Epithelial rearrangement and Drosophila gastrulation.Jonathan Bard - 1991 - Bioessays 13 (8):409-411.
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  17.  14
    How should we train PhD students in the biosciences?Jonathan Bard - 1994 - Bioessays 16 (8):529-530.
  18.  11
    Induction and the developmental Zeitgeist.Jonathan Bard - 1995 - Bioessays 17 (10):907-910.
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  19.  14
    Popper's philosophy of science: a practical tool for the working biologist.Jonathan Bard - 2000 - Bioessays 22 (2):205.
  20.  17
    What the books say: The Fifth Day of Creation.Jonathan Bard - 1990 - Bioessays 12 (6):303-306.
  21.  33
    Attracting future developmental biologists Developmental Biology_(3rd edn, 1991). By S. F. Gilbert. Sinauer Associates, Massachusetts (UK. W. H. Freeman & Co., Ltd, Oxford). 891pp. £29.95, $48.95. _Developmental Biology(1991). By L. W. Browder, C. A. Erickson and W. R. Jefferey. Saunders College Publishing, Florida. 811pp. £32 h/b, £15.50 p/b. [REVIEW]Jonathan Bard - 1992 - Bioessays 14 (4):293-294.
  22.  5
    Book Review: An introduction to bioinformatics[REVIEW]Jonathan Bard - 2005 - Bioessays 27 (9):981-982.
  23.  13
    Book Review: An introduction to bioinformatics[REVIEW]Jonathan Bard - 2005 - Bioessays 27 (9):981-982.
  24.  5
    Embryos in their full glory. Embryos: Color atlas of development (1994). Edited by Jonathan Brad. Times Mirror International Publishers, Aylesford, Kent. 224 pp. £49.95. ISBN 0 7234 1740 7. [REVIEW]Jonathan Bard & Adam S. Wilkins - 1995 - Bioessays 17 (3):269-270.
  25.  10
    Introducing development Essential developmental biology. (2005). By Jonathan Slack. Blackwell Publishing Ltd. Paperback. 365 pp. ISBN 1‐4051‐2216‐1. Principles of developmental biology. (2003) Edited by Fred Wilt & Sarah Hake. Hardback. 450 pp. ISBN 0‐393‐97430‐8. [REVIEW]Jonathan Bard - 2006 - Bioessays 28 (8):862-863.
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  26.  11
    The mouse Embryologist's Bible. Atlas of mouse development. By Matthew Kaufman. Academic Press, London. £72. 512pp. ISBN 0‐12‐402035‐6. [REVIEW]Jonathan B. L. Bard - 1992 - Bioessays 14 (12):873-873.
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  27.  15
    What's next in developmental systems? Organogenesis of the Kidney. By L. Saxén (1987). Cambridge University Press. Pp. 173. £25. [REVIEW]Jonathan Bard - 1989 - Bioessays 11 (2-3):76-77.
  28.  12
    Review: Embryos in Wax: Models from the Ziegler Studio (review). [REVIEW]Scott F. Gilbert & Jonathan Bard - 2003 - Perspectives in Biology and Medicine 46 (1):156.