Results for 'Amity Doolittle'

363 found
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  1.  27
    Indigenous Peoples' Participation in Global Conservation: Looking beyond Headdresses and Face Paint.Nels Paulson, Ann Laudati, Amity Doolittle, Meredith Welch-Devine & Pablo Pena - 2012 - Environmental Values 21 (3):255-276.
    This article explores the meaning of inclusive participation in global conservation decision-making processes. It draws on data collected in collaborative ethnographic research of the latest World Conservation Congress (WCC) held in 2008 in Barcelona, Spain. We argue that despite a discernible shift towards the incorporation of indigenous rights and indigenous peoples' representatives within the conservation equation, many challenges to full participation still exist for both indigenous peoples and other local resource users who may be affected by conservation governance decisions. Several (...)
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  2.  75
    The attempt on the life of the Tree of Life: science, philosophy and politics.W. Ford Doolittle - 2010 - Biology and Philosophy 25 (4):455-473.
    Lateral gene transfer, the exchange of genetic information between lineages, not only makes construction of a universal Tree of Life difficult to achieve, but calls into question the utility and meaning of any result. Here I review the science of prokaryotic LGT, the philosophy of the TOL as it figured in Darwin’s formulation of the Theory of Evolution, and the politics of the current debate within the discipline over how threats to the TOL should be represented outside it. We could (...)
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  3. Darwinizing Gaia: natural selection and multispecies community evolution.W. Ford Doolittle - 2024 - Cambridge, Massachuetts: The MIT Press.
    This work aims to describe how developments in thinking on evolutionary biology require re-assessment of initial rejection of the relevance and applicability of neo-Darwinian evolution to the Gaia hypothesis.
     
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  4. It’s the song, not the singer: an exploration of holobiosis and evolutionary theory.W. Ford Doolittle & Austin Booth - 2017 - Biology and Philosophy 32 (1):5-24.
    That holobionts are units of selection squares poorly with the observation that microbes are often recruited from the environment, not passed down vertically from parent to offspring, as required for collective reproduction. The taxonomic makeup of a holobiont’s microbial community may vary over its lifetime and differ from that of conspecifics. In contrast, biochemical functions of the microbiota and contributions to host biology are more conserved, with taxonomically variable but functionally similar microbes recurring across generations and hosts. To save what (...)
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  5.  67
    ‘Species’ without species.Aaron Novick & W. Ford Doolittle - 2021 - Studies in History and Philosophy of Science Part A 87 (C):72-80.
    Biological science uses multiple species concepts. Order can be brought to this diversity if we recognize two key features. First, any given species concept is likely to have a patchwork structure, generated by repeated application of the concept to new domains. We illustrate this by showing how two species concepts (biological and ecological) have been modified from their initial eukaryotic applications to apply to prokaryotes. Second, both within and between patches, distinct species concepts may interact and hybridize. We thus defend (...)
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  6. Making the most of clade selection.W. Ford Doolittle - 2017 - Philosophy of Science 84 (2):275-295.
    Clade selection is unpopular with philosophers who otherwise accept multilevel selection theory. Clades cannot reproduce, and reproduction is widely thought necessary for evolution by natural selection, especially of complex adaptations. Using microbial evolutionary processes as heuristics, I argue contrariwise, that (1) clade growth (proliferation of contained species) substitutes for clade reproduction in the evolution of complex adaptation, (2) clade-level properties favoring persistence – species richness, dispersal, divergence, and possibly intraclade cooperation – are not collapsible into species-level traits, (3) such properties (...)
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  7.  73
    Speciation without Species: A Final Word.W. Ford Doolittle - 2019 - Philosophy, Theory, and Practice in Biology 11.
    This paper, like many before it, aims to solve the “species problem” by declaring it a non-problem. It borrows its title from an earlier article by Jeff Lawrence and its philosophical concepts from Marc Ereshefsky, John Dupré, Peter Godfrey-Smith, Ken Waters, and Jody Hey. The emphasis is on bacteria, but my pragmatic species anti-realist conclusion may be a general one.
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  8. Natural selection through survival alone, and the possibility of Gaia.W. Ford Doolittle - 2014 - Biology and Philosophy 29 (3):415-423.
    Here I advance two related evolutionary propositions. (1) Natural selection is most often considered to require competition between reproducing “individuals”, sometimes quite broadly conceived, as in cases of clonal, species or multispecies-community selection. But differential survival of non-competing and non-reproducing individuals will also result in increasing frequencies of survival-promoting “adaptations” among survivors, and thus is also a kind of natural selection. (2) Darwinists have challenged the view that the Earth’s biosphere is an evolved global homeostatic system. Since there is only (...)
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  9.  37
    Microbial neopleomorphism.W. Ford Doolittle - 2013 - Biology and Philosophy 28 (2):351-378.
    Our understanding of what microbes are and how they evolve has undergone many radical shifts since the late nineteenth century, when many still believed that bacteria could be spontaneously generated and most thought microbial “species” (if any) to be unstable and interchangeable in form and function (pleomorphic). By the late twentieth century, an ontology based on single cells and definable species with predictable properties, evolving like species of animals or plants, was widely accepted. Now, however, genomic and metagenomic data show (...)
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  10.  34
    All about levels: transposable elements as selfish DNAs and drivers of evolution.W. Ford Doolittle - 2022 - Biology and Philosophy 37 (4):1-20.
    The origin and prevalence of transposable elements may best be understood as resulting from “selfish” evolutionary processes at the within-genome level, with relevant populations being all members of the same TE family or all potentially mobile DNAs in a species. But the maintenance of families of TEs as evolutionary drivers, if taken as a consequence of selection, might be better understood as a consequence of selection at the level of species or higher, with the relevant populations being species or ecosystems (...)
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  11. Life and life only: a radical alternative to life definitionism.Carlos Mariscal & W. Ford Doolittle - 2020 - Synthese 197 (7):2975-2989.
    To date, no definition of life has been unequivocally accepted by the scientific community. In frustration, some authors advocate alternatives to standard definitions. These include using a list of characteristic features, focusing on life’s effects, or categorizing biospheres rather than life itself; treating life as a fuzzy category, a process or a cluster of contingent properties; or advocating a ‘wait-and-see’ approach until other examples of life are created or discovered. But these skeptical, operational, and pluralistic approaches have intensified the debate, (...)
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  12.  19
    Horizontal persistence and the complexity hypothesis.Aaron Novick & W. Ford Doolittle - 2020 - Biology and Philosophy 35 (1):2.
    This paper investigates the complexity hypothesis in microbial evolutionary genetics from a philosophical vantage. This hypothesis, in its current version, states that genes with high connectivity are likely to be resistant to being horizontally transferred. We defend four claims. There is an important distinction between two different ways in which a gene family can persist: vertically and horizontally. There is a trade-off between these two modes of persistence, such that a gene better at achieving one will be worse at achieving (...)
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  13. Modern Synthesis is the Light of Microbial Genomics.Austin Booth, Carlos Mariscal & W. Ford Doolittle - 2016 - Annual Reviews of Microbiology 70 (1):279-297.
  14. Eukaryogenesis: how special, really?Austin Booth & W. Ford Doolittle - 2015 - Proceedings of the National Academy of Sciences of the United States of America:1-8.
    Eukaryogenesis is widely viewed as an improbable evolutionary transition uniquely affecting the evolution of life on this planet. However, scientific and popular rhetoric extolling this event as a singularity lacks rigorous evidential and statistical support. Here, we question several of the usual claims about the specialness of eukaryogenesis, focusing on both eukaryogenesis as a process and its outcome, the eukaryotic cell. We argue in favor of four ideas. First, the criteria by which we judge eukaryogenesis to have required a genuinely (...)
     
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  15.  57
    The generality of Constructive Neutral Evolution.T. D. P. Brunet & W. Ford Doolittle - 2018 - Biology and Philosophy 33 (1-2):2.
    Constructive Neutral Evolution is an evolutionary mechanism that can explain much molecular inter-dependence and organismal complexity without assuming positive selection favoring such dependency or complexity, either directly or as a byproduct of adaptation. It differs from but complements other non-selective explanations for complexity, such as genetic drift and the Zero Force Evolutionary Law, by being ratchet-like in character. With CNE, purifying selection maintains dependencies or complexities that were neutrally evolved. Preliminary treatments use it to explain specific genetic and molecular structures (...)
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  16.  15
    The role of purifying selection in the origin and maintenance of complex function.Tyler D. P. Brunet, W. Ford Doolittle & Joseph P. Bielawski - 2021 - Studies in History and Philosophy of Science Part A 87 (C):125-135.
  17.  21
    Archaebacterial genomics: The complete genome sequence of Methanococcus jannaschii.David R. Edgell & W. Ford Doolittle - 1997 - Bioessays 19 (1):1-4.
    The first complete sequence of an archaebacterial genome, that of Methanococcus jannaschii, has recently been published(1). Less than half of the open reading frames (ORFs) can be assigned a function based on similarity to known sequences in databases. These assignable ORFs fall into two general classes; those involved in transcription, translation and replication are more similar to eukaryotic homologs, while those determining metabolic processes are more similar to eubacterial versions. The immense but very rewarding task of making biological and evolutionary (...)
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  18.  20
    A Chemostat Model for Evolution by Persistence: Clade Selection and Its Explanatory Autonomy.Celso Neto & W. Ford Doolittle - 2023 - Philosophy of Science 90 (1):21-38.
    Many contemporary biologists and philosophers of biology admit that selection occurs at any level of the biological hierarchy at which entities showing heritable variation in fitness are found, while insisting that fitness at any level entails differential reproduction, not differential persistence. Those who allow that persistence can be selected doubt that selection on nonreproducing entities can be reiterated, to produce “complex adaptations.” We present here a verbal model of subclones evolving in a simple idealized chemostat that calls into question these (...)
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  19.  20
    Learn and Live?: Understanding the Cultural Focus on Nonbeneficial Cardiopulmonary Resuscitation (CPR) as a Response to Existential Distress About Death and Dying.Leah B. Rosenberg & David Doolittle - 2017 - American Journal of Bioethics 17 (2):54-55.
  20.  22
    Hierarchical Approaches to Genome Evolution.W. Ford Doolittle - 1988 - Canadian Journal of Philosophy 18 (sup1):101-133.
    In fact, nearly every scientist who has written on the general subject of evolution has felt compelled to show how deftly he can skate toward the abyss of teleology without falling in.J.H. Campbell, 163Molecular biology has as its primary objective the elucidation of the coupling between genotype and phenotype. This goal has so far been pursued within a neoDarwinian theoretical framework which is relatively limited. Within this framework we can indeed understand remarkably well the mechanisms of replication and expression of (...)
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  21. Processes and Patterns of Interaction as Units of Selection : An Introduction to ITSNTS Thinking.W. Ford Doolittle & S. Andrew Inkpen - 2018 - Pnas 115 (16):4006–4014.
     
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  22. Community-level evolutionary processes: Linking community genetics with replicator-interactor theory.Christopher Lean, W. Ford Doolittle & Joseph Bielawski - 2022 - Proceedings of the National Academy of Sciences 119 (46):e2202538119.
    Understanding community-level selection using Lewontin’s criteria requires both community-level inheritance and community-level heritability, and in the discipline of community and ecosystem genetics, these are often conflated. While there are existing studies that show the possibility of both, these studies impose community-level inheritance as a product of the experimental design. For this reason, these experiments provide only weak support for the existence of community-level selection in nature. By contrast, treating communities as interactors (in line with Hull’s replicator-interactor framework or Dawkins’s idea (...)
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  23.  7
    Hierarchical Approaches to Genome Evolution.W. Ford Doolittle - 1988 - Canadian Journal of Philosophy, Supplementary Volume 14:101-133.
    In fact, nearly every scientist who has written on the general subject of evolution has felt compelled to show how deftly he can skate toward the abyss of teleology without falling in.J.H. Campbell, 163Molecular biology has as its primary objective the elucidation of the coupling between genotype and phenotype. This goal has so far been pursued within a neoDarwinian theoretical framework which is relatively limited. Within this framework we can indeed understand remarkably well the mechanisms of replication and expression of (...)
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  24.  26
    Bacterial actins? An evolutionary perspective.Russell F. Doolittle & Amanda L. York - 2002 - Bioessays 24 (4):293-296.
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  25.  11
    Deceit, Desire, and The Dunciad : Mimetic Theory and Alexander Pope.Allan Doolittle - 2010 - Contagion: Journal of Violence, Mimesis, and Culture 17:1-26.
    In lieu of an abstract, here is a brief excerpt of the content:Deceit, Desire, and The Dunciad:Mimetic Theory and Alexander PopeAllan Doolittle (bio)Anxiety expressed over what is often termed "information overload"1 is by no means solely a phenomenon of our electronic age. Recent scholarship has traced this concern as far back as the early modern period. The increased production and dissemination of books in the sixteenth and seventeenth centuries was a source of "wonder and anxiety"2 for authors and prompted (...)
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  26.  64
    “Hearken to the Hermit-Thrush”1: A Case Study in Interdisciplinary Listening.Emily L. Doolittle - 2020 - Frontiers in Psychology 11.
    Birdsong is widely analysed and discussed by people coming from both musical and scientific backgrounds. Both approaches provide valuable insight, but I argue that it is only through combining musical and scientific points of view, as well as perspectives from more tangentially related fields, that we can obtain the best possible understanding of birdsong. In this paper, I discuss how my own training as a musician, and in particular as a composer, affects how I listen to and parse birdsong. I (...)
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  27.  24
    Permanent vs. shifting cultivation in the Eastern Woodlands of North America prior to European contact.William E. Doolittle - 2004 - Agriculture and Human Values 21 (2/3):181-189.
    Native food production in the Eastern Woodlands of North America before, and at the time of, European contact has been described by several writers as “slash-and-burn agriculture,” “shifting cultivation,” and even “swidden.” Select quotes from various early explorers, such as John Smith of Pocahontas fame, have been used out of context to support this position. Solid archaeological evidence of such practices is next to non-existent, as are ethnographic parallels from the region. In reality, the best data are documentary. Unlike previous (...)
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  28.  13
    Some Broader Evolutionary Issues Which Emerge from Contemporary Molecular Biological Data.W. Ford Doolittle - 1984 - PSA: Proceedings of the Biennial Meeting of the Philosophy of Science Association 1984:129 - 144.
    The genome contains elements which are most easily understood as the products of selection operating at the level of the genome, without regard to phenotypic effect. The properties of such elements, and more general implications of molecular biological data, are discussed.
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  29.  15
    The Master.Hilda Doolittle - 1981 - Feminist Studies 7 (3):407.
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  30.  32
    Horizontal persistence and the complexity hypothesis.Aaron Novick & W. Ford Doolittle - 2020 - Biology and Philosophy 35 (1):1-22.
    This paper investigates the complexity hypothesis in microbial evolutionary genetics from a philosophical vantage. This hypothesis, in its current version, states that genes with high connectivity are likely to be resistant to being horizontally transferred. We defend four claims. There is an important distinction between two different ways in which a gene family can persist: vertically and horizontally. There is a trade-off between these two modes of persistence, such that a gene better at achieving one will be worse at achieving (...)
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  31.  28
    Adaptive Regeneration Across Scales: Replicators and Interactors from Limbs to Forests.S. Andrew Inkpen & W. Ford Doolittle - 2021 - Philosophy, Theory, and Practice in Biology 13:1-14.
    Here we endorse Hull’s replicator/interactor framework as providing the overarching understanding sought by MacCord and Maienschein. We suggest that difficulties in seeing the regeneration of limbs by salamanders and of forest ecosystems after fires as similar evolutionary processes can be overcome in this framework. In generalizing Dawkins’s “selfish gene” perspective, Hull defined natural selection as “a process in which the differential extinction and proliferation of interactors causes the differential perpetuation of the replicators that produced them”. Although genes and bacteria are (...)
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  32.  22
    Adaptive Regeneration Across Scales: Replicators and Interactors from Limbs to Forests.S. Andrew Inkpen & W. Ford Doolittle - 2021 - Philosophy, Theory, and Practice in Biology 13:1-14.
    Diverse living systems possess the capacity for regeneration; that is, they can under some circumstances repair, re-produce, and maintain themselves in the face of disturbance or damage. Think of systems as diverse as forests, microbial biofilms, corals, salamanders, hydra, and human skin cells. This capacity is fundamental to life—without it, many biological systems would be too fragile to cope with stress and would frequently collapse—but because it is multiply realized in wildly different living systems at many scales, finding a common (...)
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  33.  48
    How microbes "jeopardize" the modern synthesis.Aaron Novick & W. Ford Doolittle - 2019 - PLOS Genetics 5 (15):e1008166.
    This editorial introduces a series of review articles concerning the ways in which recent work on microbial evolution has both deepened and challenged the modern synthesis. The authors develop a framework for thinking about theory change in biology.
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  34.  8
    A boldly comparative approach will strengthen co-evolutionary accounts of musicality's origins.Luke Rendell, Emily L. Doolittle, Ellen C. Garland & Alex South - 2021 - Behavioral and Brain Sciences 44.
    Focus on the evolutionary origins of musicality has been neglected relative to attention on language, so these new proposals are welcome stimulants. We argue for a broad comparative approach to understanding how the elements of musicality evolved, and against the use of overly simplistic evolutionary accounts.
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  35.  9
    Generic Competition for Drugs Treating Rare Diseases.Reed F. Beall, Amity E. Quinn, Aaron S. Kesselheim, Frazer A. Tessema & Ameet Sarpatwari - 2020 - Journal of Law, Medicine and Ethics 48 (4):789-795.
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  36.  36
    Mutationism, not Lamarckism, captures the novelty of CRISPR–Cas.Jeremy G. Wideman, S. Andrew Inkpen, W. Ford Doolittle & Rosemary J. Redfield - 2019 - Biology and Philosophy 34 (1):12.
    Koonin, in an article in this issue, claims that CRISPR–Cas systems are mechanisms for the inheritance of acquired adaptive characteristics, and that the operation of such systems comprises a “Lamarckian mode of evolution.” We argue that viewing the CRISPR–Cas mechanism as facilitating a form of “directed mutation” more accurately represents how the system behaves and the history of neoDarwinian thinking, and is to be preferred.
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  37.  5
    Book Review: Introduction to protein science: architecture, function and genomics. [REVIEW]Russell Doolittle - 2005 - Bioessays 27 (8):860-861.
  38.  43
    Comment on “Does constructive neutral evolution play an important role in the origin of cellular complexity?”. [REVIEW]W. Ford Doolittle, Julius Lukeš, John M. Archibald, Patrick J. Keeling & Michael W. Gray - 2011 - Bioessays 33 (6):427-429.
  39.  17
    Comment on “Does constructive neutral evolution play an important role in the origin of cellular complexity?” DOI 10.1002/bies.201100010. [REVIEW]W. Ford Doolittle, Julius Lukeš, John M. Archibald, Patrick J. Keeling & Michael W. Gray - 2011 - Bioessays 33 (6):427-429.
  40.  7
    The Visual Arts in Higher Education. [REVIEW]Warren Doolittle - 1968 - Journal of Aesthetic Education 2 (2):138.
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  41.  29
    The coupling of taxonomy and function in microbiomes.S. Andrew Inkpen, Gavin M. Douglas, T. D. P. Brunet, Karl Leuschen, W. Ford Doolittle & Morgan G. I. Langille - 2017 - Biology and Philosophy 32 (6):1225-1243.
    Microbiologists are transitioning from the study and characterization of individual strains or species to the profiling of whole microbiomes and microbial ecology. Equipped with high-throughput methods for studying the taxonomic and functional characteristics of diverse samples, they are just beginning to encounter the conceptual, theoretical, and experimental problems of comparing taxonomy to function, and extracting useful measures from such comparisons. Although still unresolved, these problems are well studied in macro-ecology and are reiterated here as an historical precautionary for microbial ecologists. (...)
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  42. Eukaryotes first: how could that be? [REVIEW]Carlos Mariscal & W. Ford Doolittle - 2015 - Philosophical Transactions of the Royal Society B: Biological Sciences 370:1-10.
    In the half century since the formulation of the prokaryote : eukaryote dichotomy, many authors have proposed that the former evolved from something resembling the latter, in defiance of common (and possibly common sense) views. In such ‘eukaryotes first’ (EF) scenarios, the last universal common ancestor is imagined to have possessed significantly many of the complex characteristics of contemporary eukaryotes, as relics of an earlier ‘progenotic’ period or RNAworld. Bacteria and Archaea thus must have lost these complex features secondarily, through (...)
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  43.  16
    Barriers to Advance Care Planning in End-Stage Renal Disease: Who is to Blame, and What Can be Done?Alan Taylor Kelley, Jeffrey Turner & Benjamin Doolittle - 2018 - The New Bioethics 24 (2):150-157.
    Patients with end-stage renal disease experience significant mortality and morbidity, including cognitive decline. Advance care planning has been emphasized as a responsibility and priority of physicians caring for patients with chronic kidney disease in order to align with patient values before decision-making capacity is lost and to avoid suffering. This emphasis has proven ineffective, as illustrated in the case of a patient treated in our hospital. Is this ineffectiveness a consequence of failure in the courtroom or the clinic? Through our (...)
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  44.  37
    Assessing school climate within a PBIS framework: using multi-informant assessment to identify strengths and needs.Anthony G. James, Lauren Smallwood, Amity Noltemeyer & Jennifer Green - 2018 - Educational Studies 44 (1):115-118.
    A multi-method, multi-informant method was used to collect data from diverse stakeholders about school climate to inform school improvement efforts as part of the Positive Behaviour Intervention Supports framework. Teachers, administrators, school staff and students completed surveys and parents participated in focus groups to gather perspectives about school climate. Respondents identified safety as a strength at the school, staff and student results suggested interpersonal relationships as an area for improvement and staff identified parent involvement as an area for growth. Both (...)
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  45.  26
    Acute glycine administration increases mismatch negativity in chronic schizophrenia.Greenwood Lisa-Marie, Leung Sumie, Michie Patricia, Green Amity, Nathan Pradeep, Fitzgerald Paul, Johnston Patrick, Solowij Nadia, Kulkarni Jayashri & Croft Rodney - 2015 - Frontiers in Human Neuroscience 9.
  46.  12
    Une amitié américaine: Jacques et Raïssa Maritain, Emily Holmes Coleman: 1942-1971.Jacques Maritain - 2013 - Paris: Desclée de Brouwer. Edited by Raïssa Maritain, Emily Holmes Coleman & Claire Coleman.
    New York, été 1942. Peu après la déclaration de la guerre, les Maritain ont quitté la France et se sont réfugiés aux Etats - Unis. Tout en poursuivant son oeuvre littéraire, Jacques donne des cours et des conférences à travers le pays. Raïssa publie Les grandes amitiés et achève la rédaction de ses souvenirs, souvent interrompue par la maladie et les souffrances qui l'accablent. L'arrachement à leur pays, le désastre en Europe et le sort des Juifs ne cessent de peser (...)
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  47. Charles Doolittle Walcott, Paleontologist.Ellis L. Yochelson & D. Oldroyd - 1999 - Annals of Science 56 (3):318-319.
     
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  48. L'Amitié au XVIIIe siècle.Frédérick Gerson - 1974 - Paris: la Pensée universelle.
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  49.  5
    Amitiés philosophiques.François Dosse - 2021 - Paris: Odile Jacob.
    Aron-Sartre, Foucault-Deleuze, Ricoeur-Derrida, Derrida-Lévinas... D'où sont nées ces amitiés entre des philosophes qui ont marqué leur temps? En quoi ces "couples" sont-ils absolument singuliers et que nous disent-ils de leur époque et de ses enjeux intellectuels? "Parce que c'était lui, parce que c'était moi", écrivait Montaigne à propos de l'amitié qui le liait à La Boétie, s'exclamant également : "O mes amis, il n'y a nul amy! " S'appuyant sur leurs correspondances, des écrits peu connus, des récits de témoins, François (...)
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  50.  29
    Amitié, attirance et amour chez S. Thomas d'Aquin.James Mcevoy - 1993 - Revue Philosophique De Louvain 91 (3):383-408.
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