ENCODE and the parts of the human genome

Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences 72 (C):28-37 (2018)
  Copy   BIBTEX

Abstract

This paper examines a specific kind of part-whole relations that exist in the molecular genetic domain. The central question is under which conditions a particular molecule, such as a DNA sequence, is a biological part of the human genome. I address this question by analyzing how biologists in fact partition the human genome into parts. This paper thus presents a case study in the metaphysics of biological practice. I develop a metaphysical account of genomic parthood by analyzing the investigative and reasoning practices in the ENCODE (ENCyclopedia Of DNA Elements) project. My account reveals two conditions that determine whether a molecule is a part of the human genome (i.e., a genomic part). First, genomic parts must possess a causal role function in the genome as a whole, that is, their functions must contribute to the genome directing the overall functioning of the cell. Second, genomic parts must have a specific chemical structure and be actual segments of the DNA sequence of the genome.

Links

PhilArchive



    Upload a copy of this work     Papers currently archived: 91,202

External links

Setup an account with your affiliations in order to access resources via your University's proxy server

Through your library

Similar books and articles

The genome as a developmental organ.Ehud Lamm - 2014 - Journal of Physiology 592 (11):2237-2244.
Human Genome Editing and Ethical Considerations.Kewal Krishan, Tanuj Kanchan & Bahadur Singh - 2016 - Science and Engineering Ethics 22 (2):597-599.
The human genome project and the social contract: A law policy approach.Christian Byk - 1992 - Journal of Medicine and Philosophy 17 (4):371-380.
Gender And The Human Genome.R. Chadwick - 2009 - Mens Sana Monographs 7 (1):10.

Analytics

Added to PP
2018-10-30

Downloads
20 (#720,454)

6 months
7 (#339,156)

Historical graph of downloads
How can I increase my downloads?

Author's Profile

Marie I. Kaiser
Bielefeld University

Citations of this work

Add more citations

References found in this work

Thinking about mechanisms.Peter Machamer, Lindley Darden & Carl F. Craver - 2000 - Philosophy of Science 67 (1):1-25.
Functional analysis.Robert E. Cummins - 1975 - Journal of Philosophy 72 (November):741-64.
The Metaphysics of Constitutive Mechanistic Phenomena.Marie I. Kaiser & Beate Krickel - 2017 - British Journal for the Philosophy of Science 68 (3).
Functional analysis and proper functions.Paul E. Griffiths - 1993 - British Journal for the Philosophy of Science 44 (3):409-422.
The Philosophical Grammar of Scientific Practice.Hasok Chang - 2011 - International Studies in the Philosophy of Science 25 (3):205-221.

View all 9 references / Add more references