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  1. The tissue organization field theory of cancer: A testable replacement for the somatic mutation theory.Ana M. Soto & Carlos Sonnenschein - 2011 - Bioessays 33 (5):332-340.
    The somatic mutation theory (SMT) of cancer has been and remains the prevalent theory attempting to explain how neoplasms arise and progress. This theory proposes that cancer is a clonal, cell‐based disease, and implicitly assumes that quiescence is the default state of cells in multicellular organisms. The SMT has not been rigorously tested, and several lines of evidence raise questions that are not addressed by this theory. Herein, we propose experimental strategies that may validate the SMT. We also call attention (...)
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  • ‚Hervorbringende Organe‘, ‚bildende Kraft‘?: Heideggers Gegenentwurf zu Kants Theorie des Organismus.Anne Sophie Meincke - 2023 - Deutsche Zeitschrift für Philosophie 71 (1):52-80.
    This article presents Heidegger’s little-known theory of the organism developed in his 1929/30 lecture The Fundamental Concepts of Metaphysics and interprets it as an antithesis to Kant’s theory of the organism contained in his Critique of Judgement (1790 and 1792/3). Heidegger drops Kant’s transcendental caveats in favour of a robust ontological understanding of organismic teleology. Moreover, Heidegger’s alternative approach draws attention to the fact that Kant’s notion of a ‘natural end’ (Naturzweck), by being tied to the idea of intelligent design, (...)
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  • Experiment, Downward Causation, and Interventionist Levels of Explanation.Veli-Pekka Parkkinen - 2016 - International Studies in the Philosophy of Science 30 (3):245-261.
    This article considers interventionist arguments for downward causation and non-fundamental level causal explanation from the point of view of inferring causation from experiments. Several authors have utilised the interventionist theory of causal explanation to argue that the causal exclusion argument is moot and that higher-level as well as downward causation is real. I show that this argument can be made when levels are understood as levels of grain, leaving us with a choice between causal explanations pitched at different levels. Causal (...)
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  • Emergence, Closure and Inter-level Causation in Biological Systems.Matteo Mossio, Leonardo Bich & Alvaro Moreno - 2013 - Erkenntnis 78 (2):153-178.
    In this paper, we advocate the idea that an adequate explanation of biological systems requires appealing to organizational closure as an emergent causal regime. We first develop a theoretical justification of emergence in terms of relatedness, by arguing that configurations, because of the relatedness among their constituents, possess ontologically irreducible properties, providing them with distinctive causal powers. We then focus on those emergent causal powers exerted as constraints, and we claim that biological systems crucially differ from other natural systems in (...)
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  • Entropies and the Anthropocene crisis.Maël Montévil - 2021 - AI and Society:1-21.
    The Anthropocene crisis is frequently described as the rarefaction of resources or resources per capita. However, both energy and minerals correspond to fundamentally conserved quantities from the perspective of physics. A specific concept is required to understand the rarefaction of available resources. This concept, entropy, pertains to energy and matter configurations and not just to their sheer amount. However, the physics concept of entropy is insufficient to understand biological and social organizations. Biological phenomena display both historicity and systemic properties. A (...)
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  • Entropies and the Anthropocene crisis.Maël Montévil - 2023 - AI and Society 38 (6):2451-2471.
    The Anthropocene crisis is frequently described as the rarefaction of resources or resources per capita. However, both energy and minerals correspond to fundamentally conserved quantities from the perspective of physics. A specific concept is required to understand the rarefaction of available resources. This concept, entropy, pertains to energy and matter configurations and not just to their sheer amount. However, the physics concept of entropy is insufficient to understand biological and social organizations. Biological phenomena display both historicity and systemic properties. A (...)
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  • Distinguishing Between Inter-domain and Intra-domain Emergence.Olimpia Lombardi & María J. Ferreira Ruiz - 2019 - Foundations of Science 24 (1):133-151.
    Currently, there are almost as many conceptions of emergence as authors who address the issue. Most literature on the matter focuses either on discussing, evaluating and comparing particular contributions or accounts of emergence, or on assessing a particular case study. Our aim in this paper is rather different. We here set out to introduce a distinction that has not been sufficiently taken into account in previous discussions on this topic: the distinction between inter-domain emergence—a relation between items belonging to different (...)
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  • The Biophysics of Regenerative Repair Suggests New Perspectives on Biological Causation.Michael Levin - 2020 - Bioessays 42 (2):1900146.
    Evolution exploits the physics of non‐neural bioelectricity to implement anatomical homeostasis: a process in which embryonic patterning, remodeling, and regeneration achieve invariant anatomical outcomes despite external interventions. Linear “developmental pathways” are often inadequate explanations for dynamic large‐scale pattern regulation, even when they accurately capture relationships between molecular components. Biophysical and computational aspects of collective cell activity toward a target morphology reveal interesting aspects of causation in biology. This is critical not only for unraveling evolutionary and developmental events, but also for (...)
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  • Distinguishing Between Inter-domain and Intra-domain Emergence.María J. Ferreira Ruiz & Olimpia Lombardi - 2019 - Foundations of Science 24 (1):133-151.
    Currently, there are almost as many conceptions of emergence as authors who address the issue. Most literature on the matter focuses either on discussing, evaluating and comparing particular contributions or accounts of emergence, or on assessing a particular case study. Our aim in this paper is rather different. We here set out to introduce a distinction that has not been sufficiently taken into account in previous discussions on this topic: the distinction between inter-domain emergence—a relation between items belonging to different (...)
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  • SMT and TOFT: Why and How They are Opposite and Incompatible Paradigms.Mariano Bizzarri & Alessandra Cucina - 2016 - Acta Biotheoretica 64 (3):221-239.
    The Somatic Mutation Theory has been challenged on its fundamentals by the Tissue Organization Field Theory of Carcinogenesis. However, a recent publication has questioned whether TOFT could be a valid alternative theory of carcinogenesis to that presented by SMT. Herein we critically review arguments supporting the irreducible opposition between the two theoretical approaches by highlighting differences regarding the philosophical, methodological and experimental approaches on which they respectively rely. We conclude that SMT has not explained carcinogenesis due to severe epistemological and (...)
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  • Pluralists about Pluralism? Versions of Explanatory Pluralism in Psychiatry.Jeroen Van Bouwel - 2014 - In M. C. Galavotti, D. Dieks, W. J. Gonzalez, S. Hartmann, Th Uebel & M. Weber (eds.), New Directions in Philosophy of Science (The Philosophy of Science in a European Perspective Series). Springer. pp. 105-119.
    In this contribution, I comment on Raffaella Campaner’s defense of explanatory pluralism in psychiatry (in this volume). In her paper, Campaner focuses primarily on explanatory pluralism in contrast to explanatory reductionism. Furthermore, she distinguishes between pluralists who consider pluralism to be a temporary state on the one hand and pluralists who consider it to be a persisting state on the other hand. I suggest that it would be helpful to distinguish more than those two versions of pluralism – different understandings (...)
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  • Cancer.Anya Plutynski - 2019 - Stanford Encyclopedia of Philosophy.
    Cancer—and scientific research on cancer—raises a variety of compelling philosophical questions. This entry will focus on four topics, which philosophers of science have begun to explore and debate. First, scientific classifications of cancer have as yet failed to yield a unified taxonomy. There is a diversity of classificatory schemes for cancer, and while some are hierarchical, others appear to be “cross-cutting,” or non-nested. This literature thus raises a variety of questions about the nature of the disease and disease classification. Second, (...)
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  • Conceptual Challenges in the Theoretical Foundations of Systems Biology.Marta Bertolaso & Emanuele Ratti - 2018 - In Mariano Bizzarri (ed.), Systems Biology. New York: Springer, Humana Press. pp. 1-13.
    In the last decade, Systems Biology has emerged as a conceptual and explanatory alternative to reductionist-based approaches in molecular biology. However, the foundations of this new discipline need to be fleshed out more carefully. In this paper, we claim that a relational ontology is a necessary tool to ground both the conceptual and explanatory aspects of Systems Biology. A relational ontology holds that relations are prior—both conceptually and explanatory—to entities, and that in the biological realm entities are defined primarily by (...)
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  • Qu'y at-il de vital dans un organisme vivant?Paul-Antoine Miquel - 2005 - Bulletin d'Analyse Phénoménologique 1.
    Introduction 1) Une épistémologie non fondationnelle § 1. Concernant l?usage philosophique de l?adjectif « vital », on s?attend à voir surgir une distinction entre le vivant et le vécu, comme si d?emblée nous pouvions et devions accepter que le vital soit aussi quelque chose d?éprouvé par la conscience, par opposition au vivant qui serait simplement observé et expliqué par la science. Pourquoi, dès lors, faudrait-il rechercher dans ou chez les êtres vivants quelque chose de vital ? Cela ne reviendrait-il pas (...)
     
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