- Towards a dispositionalist (and unifying) account of addiction.Robert M. Kelly - 2023 - Theoretical Medicine and Bioethics 44 (1):21-40.details
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Ontohub: A semantic repository engine for heterogeneous ontologies.Mihai Codescu, Eugen Kuksa, Oliver Kutz, Till Mossakowski & Fabian Neuhaus - 2017 - Applied ontology 12 (3-4):275-298.details
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Biometaphysics.Barry Smith - 2009 - In Robin Le Poidevin, Simons Peter, McGonigal Andrew & Ross P. Cameron (eds.), The Routledge Companion to Metaphysics. New York: Routledge. pp. 537-544.details
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A visual representation of part-whole relationships in BFO-conformant ontologies.Jose M. Parente de Oliveira & Barry Smith - 2017 - In Á Rocha, A. M. Correia, H. Adeli, L. P. Reis & S. Costanzo (eds.), Recent Advances in Information Systems and Technologies (Advances in Intelligent Systems and Computing, 569). Springer. pp. 184-194.details
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The evaluation of ontologies: Editorial review vs. democratic ranking.Barry Smith - 2008 - In Proceedings of InterOntology (Tokyo, Japan, 26-27 February 2008),. Keio University Press. pp. 127-138.details
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Representing Mental Functioning: Ontologies for Mental Health and Disease.Janna Hastings, Werner Ceusters, Mark Jensen, Kevin Mulligan & Barry Smith - 2012 - In Janna Hastings, Werner Ceusters, Mark Jensen, Kevin Mulligan & Barry Smith (eds.), Towards an Ontology of Mental Functioning (ICBO Workshop). CEUR.details
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A domain ontology for the non-coding RNA field.Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg, Barry Smith, Michael T. Zimmermann, Guoqian Jiang & Yu Lin - 2015 - In Huang Jingshan, Eilbeck Karen, Blake Judith A., Dou Dejing, Natale Darren A., Ruttenberg Alan, Smith Barry, Zimmermann Michael T., Jiang Guoqian & Lin Yu (eds.), IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2015). pp. 621-624.details
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A plant disease extension of the Infectious Disease Ontology.Ramona Walls, Barry Smith, Elser Justin, Goldfain Albert, W. Stevenson Dennis & Pankaj Jaiswal - 2012 - In Walls Ramona, Smith Barry, Justin Elser, Albert Goldfain & Stevenson Dennis W. (eds.), Proceeedings of the Third International Conference on Biomedical Ontology (CEUR 897). pp. 1-5.details
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The Plant Ontology: A common reference ontology for plants.L. Walls Ramona, D. Cooper Laurel, Elser Justin, W. Stevenson Dennis, Barry Smith, Mungall Chris, A. Gandolfo Maria & Jaiswal Pankaj - 2010 - In Walls Ramona L., Cooper Laurel D., Justin Elser, Stevenson Dennis W., Smith Barry, Chris Mungall, Gandolfo Maria A. & Pankaj Jaiswal (eds.), Proceedings of the Workshop on Bio-Ontologies, ISMB, Boston, July, 2010.details
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Constructing a lattice of Infectious Disease Ontologies from a Staphylococcus aureus isolate repository.Albert Goldfain, Lindsay G. Cowell & Barry Smith - 2012 - In Goldfain Albert, Cowell Lindsay G. & Smith Barry (eds.), Proceeedings of the Third International Conference on Biomedical Ontology (CEUR 897).details
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Annotating affective neuroscience data with the Emotion Ontology.Janna Hastings, Werner Ceusters, Kevin Mulligan & Barry Smith - 2012 - In Janna Hastings, Werner Ceusters, Kevin Mulligan & Barry Smith (eds.), Third International Conference on Biomedical Ontology. ICBO. pp. 1-5.details
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ICBO 2009: Proceedings of the First International Conference on Biomedical Ontology.Barry Smith (ed.) - 2009 - Buffalo: NCOR.details
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Species Classification for Neuroscience Literature Based on Span of Interest Using Sequence-to-Sequence Learning Model.Hongyin Zhu, Yi Zeng, Dongsheng Wang & Cunqing Huangfu - 2020 - Frontiers in Human Neuroscience 14.details
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Bootstrapping the applied ontology practice: Ontology communities, then and now.Peter P. Yim - 2015 - Applied ontology 10 (3-4):229-241.details
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Cognitive neuroscience 2.0: building a cumulative science of human brain function.Tal Yarkoni, Russell A. Poldrack, David C. Van Essen & Tor D. Wager - 2010 - Trends in Cognitive Sciences 14 (11):489-496.details
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Making Biomedical Sciences publications more accessible for machines.Joris Van Meenen, Hanne Leysen, Hongyu Chen, Rudi Baccarne, Deborah Walter, Bronwen Martin & Stuart Maudsley - 2022 - Medicine, Health Care and Philosophy 25 (2):179-190.details
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Evaluating and extending the Informed Consent Ontology for representing permissions from the clinical domain.Elizabeth E. Umberfield, Cooper Stansbury, Kathleen Ford, Yun Jiang, Sharon L. R. Kardia, Andrea K. Thomer & Marcelline R. Harris - 2022 - Applied ontology 17 (2):321-336.details
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Natural necessity: An introductory guide for ontologists.Fumiaki Toyoshima - 2020 - Applied ontology 15 (1):61-89.details
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Affordances and their ontological core.Fumiaki Toyoshima, Adrien Barton & Jean-François Ethier - 2022 - Applied ontology 17 (2):285-320.details
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Cognitive neuroscience 2.0: building a cumulative science of human brain function.Tor D. Wager Tal Yarkoni, Russell A. Poldrack, David C. Van Essen - 2010 - Trends in Cognitive Sciences 14 (11):489.details
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“Just one animal among many?” Existential phenomenology, ethics, and stem cell research.Norman K. Swazo - 2010 - Theoretical Medicine and Bioethics 31 (3):197-224.details
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Coordinating dissent as an alternative to consensus classification: insights from systematics for bio-ontologies.Beckett Sterner, Joeri Witteveen & Nico Franz - 2020 - History and Philosophy of the Life Sciences 42 (1):1-25.details
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Ontological realism: A methodology for coordinated evolution of scientific ontologies.Barry Smith & Werner Ceusters - 2010 - Applied ontology 5 (3):139-188.details
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Concept systems and ontologies: Recommendations for basic terminology.Gunnar O. Klein & Barry Smith - 2010 - Transactions of the Japanese Society for Artificial Intelligence 25 (3):433-441.details
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SNOMED CT and Basic Formal Ontology – convergence or contradiction between standards? The case of “clinical finding”.Stefan Schulz, James T. Case, Peter Hendler, Daniel Karlsson, Michael Lawley, Ronald Cornet, Robert Hausam, Harold Solbrig, Karim Nashar, Catalina Martínez-Costa & Yongsheng Gao - 2023 - Applied ontology 18 (3):207-237.details
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Consolidating SNOMED CT's ontological commitment.Stefan Schulz, Ronald Cornet & Kent Spackman - 2011 - Applied ontology 6 (1):1-11.details
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Overcoming the ontology enrichment bottleneck with quick term templates.Philippe Rocca-Serra, Alan Ruttenberg, Martin J. O'Connor, Patricia L. Whetzel, Daniel Schober, Jay Greenbaum, Mélanie Courtot, Ryan R. Brinkman, Susanna Assunta Sansone & Richard Scheuermann - 2011 - Applied ontology 6 (1):13-22.details
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Engineering use cases for modular development of ontologies in OWL.Alan Rector, Sebastian Brandt, Nick Drummond, Matthew Horridge, Colin Pulestin & Robert Stevens - 2012 - Applied ontology 7 (2):113-132.details
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Open Biomedical Ontologies applied to prostate cancer.James A. Overton, Cesare Romagnoli & Rethy Chhem - 2011 - Applied ontology 6 (1):35-51.details
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BFO: Basic Formal Ontology.J. Neil Otte, John Beverley & Alan Ruttenberg - 2022 - Applied ontology 17 (1):17-43.details
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An Ontological Approach to Representing the Product Life Cycle.J. Neil Otte, Dimitris Kiritsi, Munira Mohd Ali, Ruoyu Yang, Binbin Zhang, Ron Rudnicki, Rahul Rai & Barry Smith - 2019 - Applied ontology 14 (2):1-19.details
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Ontology development is consensus creation, not (merely) representation.Fabian Neuhaus & Janna Hastings - 2022 - Applied ontology 17 (4):495-513.details
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Introduction: What is Ontology for?Katherine Munn - 2008 - In Katherine Munn & Barry Smith (eds.), Applied Ontology: An Introduction. Walter de Gruyter. pp. 7-19.details
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Applied Ontology: An Introduction.Katherine Munn & Barry Smith (eds.) - 2008 - Frankfurt: ontos.details
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Flexibility and utility of the cell cycle ontology.Vladimir Mironov, Erick Antezana, Mikel Egaña, Ward Blondé, Bernard De Baets, Martin Kuiper & Robert Stevens - 2011 - Applied ontology 6 (3):247-261.details
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Realism and Reference Ontologies: Considerations, Reflections, and Problems.Gary H. Merrill - 2010 - Applied ontology 5 (3-4):189-221.details
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Aging Neuro-Behavior Ontology.Fernando Martínez-Santiago, M. Rosario García-Viedma, John A. Williams, Luke T. Slater & Georgios V. Gkoutos - 2020 - Applied ontology 15 (2):219-239.details
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GFO: The General Formal Ontology.Frank Loebe, Patryk Burek & Heinrich Herre - 2022 - Applied ontology 17 (1):71-106.details
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Classificatory Theory in Data-intensive Science: The Case of Open Biomedical Ontologies.Sabina Leonelli - 2012 - International Studies in the Philosophy of Science 26 (1):47 - 65.details
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Analytic Metaphysics versus Naturalized Metaphysics: The Relevance of Applied Ontology.Baptiste Le Bihan & Adrien Barton - 2021 - Erkenntnis 86 (1):21-37.details
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Are bio-ontologies metaphysical theories?Oliver M. Lean - 2021 - Synthese 199 (3-4):11587-11608.details
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Mapping the Patient’s Experience: An Applied Ontological Framework for Phenomenological Psychopathology.Rasmus Rosenberg Larsen & Janna Hastings - 2020 - Phenomenology and Mind 18:200-219.details
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An empirically-based framework for ontology modularisation.Zubeida Casmod Khan & C. Maria Keet - 2015 - Applied ontology 10 (3-4):171-195.details
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ROMAIN: Towards a BFO compliant reference ontology for industrial maintenance.Mohamed Hedi Karray, Farhad Ameri, Melinda Hodkiewicz & Thierry Louge - 2019 - Applied ontology 14 (2):155-177.details
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Modular materialisation of Datalog programs.Pan Hu, Boris Motik & Ian Horrocks - 2022 - Artificial Intelligence 308 (C):103726.details
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The RNA Ontology (RNAO): an ontology for integrating RNA sequence and structure data.Robert Hoehndorf, Colin Batchelor, Thomas Bittner, Michel Dumontier, Karen Eilbeck, Rob Knight, Chris J. Mungall, Jane S. Richardson, Jesse Stombaugh & Eric Westhof - 2011 - Applied ontology 6 (1):53-89.details
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GFO-Bio: A biological core ontology.Robert Hoehndorf, Frank Loebe, Roberto Poli, Heinrich Herre & Janet Kelso - 2008 - Applied ontology 3 (4):219-227.details
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Interdyscyplinarne perspektywy rozwoju, integracji i zastosowań ontologii poznawczych.Joanna Hastings, Gwen A. Frishkoff, Barry Smith, Mark Jensen, Russell A. Poldrack, Jane Lomax, Anita Bandrowski, Fahim Imam, Jessica A. Turner & Maryann E. Martone - 2016 - Avant: Trends in Interdisciplinary Studies 7 (3):101-117.details
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Guidelines for the reuse of ontology content.Michael Halper, Larisa N. Soldatova, Mathias Brochhausen, Fatima Sabiu Maikore, Christopher Ochs & Yehoshua Perl - 2023 - Applied ontology 18 (1):5-29.details
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Une ontologie dispositionnelle du risque.Olivier Grenier & Adrien Barton - 2021 - Lato Sensu: Revue de la Société de Philosophie des Sciences 8 (2):58-69.details
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