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  1. Is a Cognitive Revolution in Theoretical Biology Underway?Tiago Rama - forthcoming - Foundations of Science.
    The foundations of biology have been a topic of debate for the past few decades. The traditional perspective of the Modern Synthesis, which portrays organisms as passive entities with limited role in evolutionary theory, is giving way to a new paradigm where organisms are recognized as active agents, actively shaping their own phenotypic traits for adaptive purposes. Within this context, this article raises the question of whether contemporary biological theory is undergoing a cognitive revolution. This inquiry can be approached in (...)
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  • Communication: Where Evolutionary Linguistics Went Wrong.Guillermo Lorenzo & Sergio Balari - 2010 - Biological Theory 5 (3):228-239.
    In this article we offer a detailed assessment of current approaches to the origins of language, with a special foots on their historical and theoretical underpinnings. It is a widely accepted view within evolutionary linguistics that an account of the emergence of human language necessarily involves paying special attention to its communicative function and its relation to other animal communication systems. Ever since Darwin, some variant of this view has constituted the mainstream version in evolutionary linguistics; however, it is our (...)
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  • Pere Alberch’s Developmental Morphospaces and the Evolution of Cognition.Sergio Balari & Guillermo Lorenzo - 2008 - Biological Theory 3 (4):297-304.
    In this article we argue for an extension of Pere Alberch’s notion of developmental morphospace into the realm of cognition and introduce the notion of cognitive phenotype as a new tool for the evolutionary and developmental study of cognitive abilities.
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  • Adolf Meyer-Abich, Holism, and the Negotiation of Theoretical Biology.Kevin S. Amidon - 2008 - Biological Theory 3 (4):357-370.
    Adolf Meyer-Abich spent his career as one of the most vigorous and varied advocates in the biological sciences. Primarily a philosophical proponent of holistic thought in biology, he also sought through collaboration with empirically oriented colleagues in biology, medicine, and even physics to develop arguments against mechanistic and reductionistic positions in the life sciences, and to integrate them into a newly disciplinary theoretical biology. He participated in major publishing efforts including the founding of Acta Biotheoretica. He also sought international contacts (...)
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  • Animal suffering, evolution, and the origins of evil: Toward a “free creatures” defense.Joshua M. Moritz - 2014 - Zygon 49 (2):348-380.
    Does an affirmation of theistic evolution make the task of theodicy impossible? In this article, I will review a number of ancient and contemporary responses to the problem of evil as it concerns animal suffering and suggest a possible way forward which employs the ancient Jewish insight that evil—as resistance to God's will that results in suffering and alienation from God's purposes—precedes the arrival of human beings and already has a firm foothold in the nonhuman animal world long before humans (...)
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  • Evolution, Development, and Human Social Cognition.Tyler J. Wereha & Timothy P. Racine - 2012 - Review of Philosophy and Psychology 3 (4):559-579.
    Explaining the causal origins of what are taken to be uniquely human capacities for understanding the mind in the first years of life is a primary goal of social cognitive development research, which concerns so called “theory of mind” or “mindreading” skills. We review and discuss particular examples of this research in the context of its underlying evolutionary conceptual framework known as the neo-Darwinian modern synthesis. It is increasingly recognized that the modern synthesis is limited in its neglect of developmental (...)
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  • Two Purposes of Black Hole Production.Clément Vidal - 2012 - Foundations of Science 17 (1):13-15.
    Crane envisions the speculative conjecture that intelligent civilizations might want and be able to produce black holes in the very far future. He implicitly suggests two main purposes of this enterprise: (i) energy production and (ii) universe production. We discuss those two options. The commentary is obviously highly speculative and should be read accordingly.
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  • Model Organisms as Simulators: The Context of Cross-Species Research and Emergence.Sim-Hui Tee - 2019 - Axiomathes 29 (4):363-382.
    Model organisms are a living form of scientific models. Despite the widespread use of model organisms in scientific research, the actual representational relationship between model organisms and their target species is often poorly characterized in the context of cross-species research. Many model organisms do not represent the target species adequately, let alone accurately. This is partly due to the complex and emergent life phenomena in the organism, and partly due to the fact that a model organism is always taken to (...)
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  • On Koichiro Matsuno’s Paper “Molecular Semiotics Toward the Emergence of Life”.Stanley N. Salthe - 2008 - Biosemiotics 1 (1):145-146.
  • Development (and Evolution) of the Universe.Stanley N. Salthe - 2010 - Foundations of Science 15 (4):357-367.
    I distinguish Nature from the World. I also distinguish development from evolution. Development is progressive change and can be modeled as part of Nature, using a specification hierarchy. I have proposed a ‘canonical developmental trajectory’ of dissipative structures with the stages defined thermodynamically and informationally. I consider some thermodynamic aspects of the Big Bang, leading to a proposal for reviving final cause. This model imposes a ‘hylozooic’ kind of interpretation upon Nature, as all emergent features at higher levels would have (...)
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  • A hierarchical framework for levels of reality: Understanding through representation. [REVIEW]Stanley N. Salthe - 2009 - Axiomathes 19 (1):87-99.
    Levels of reality reflect one kind of complexity, which can be modeled using a specification hierarchy. Levels emerged during the Big Bang, as physical degrees of freedom became increasingly fixed as the expanding universe developed, and new degrees of freedom associated with higher levels opened up locally, requiring new descriptive semantics. History became embodied in higher level entities, which are increasingly individuated, aggregate patterns of lower level entities. Development is an epigenetic trajectory from vaguer to more definite and individuated embodiment, (...)
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  • Historical materialism as mediation between the physical and the meaningful.Jeff Noonan - 2020 - Philosophy and Social Criticism 47 (9):1043-1059.
    The article argues that historical materialism is not only a theory of historical change but more generally a mediation between the natural foundations of human life and its meaningful symbolic expressions. The article begins with an interpretation of the general philosophical significance of the basic premises of historical materialism as they are sketched in the German Ideology. I argue that these premises point us in two different directions: down, towards a scientific understanding of the natural world, and up, towards interpretations (...)
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  • Kant’s Emergence and Sellarsian Cognitive Science.Richard McDonough - 2014 - Open Journal of Philosophy 4 (1):44-53.
  • Devo-darwinismo : lo que el lenguaje nos enseña sobre el papel del desarrollo en la evolución natural.Guillermo Lorenzo - 2010 - Endoxa 24:247.
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  • Rediscovering Waddington in the post‐genomic age.Heather A. Jamniczky, Julia C. Boughner, Campbell Rolian, Paula N. Gonzalez, Christopher D. Powell, Eric J. Schmidt, Trish E. Parsons, Fred L. Bookstein & Benedikt Hallgrímsson - 2010 - Bioessays 32 (7):553-558.
  • Visions of evolution: self-organization proposes what natural selection disposes.David Batten, Stanley Salthe & Fabio Boschetti - 2008 - Biological Theory 3 (1):17-29.
    This article reviews the seven “visions” of evolution proposed by Depew and Weber , concluding that each posited relationship between natural selection and self-organization has suited different aims and approaches. In the second section of the article, we show that these seven viewpoints may be collapsed into three fundamentally different ones: natural selection drives evolution; self-organization drives evolution; and natural selection and self-organization are complementary aspects of the evolutionary process. We then argue that these three approaches are not mutually exclusive, (...)
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  • The re-emergence of emergence, and the causal role of synergy in emergent evolution.Peter A. Corning - 2012 - Synthese 185 (2):295-317.
    Despite its current popularity, “emergence” is a concept with a venerable history and an elusive, ambiguous standing in contemporary evolutionary theory. This paper briefly recounts the history of the term and details some of its current usages. Not only are there radically varying interpretations about how to define emergence but “reductionist” and “holistic” theorists hold very different views about the issue of causation. However, these two seemingly polar positions are not irreconcilable. Reductionism, or detailed analysis of the parts and their (...)
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  • Does Species Evolution Follow Scale Laws? First Applications of the Scale Relativity Theory to Fossil and Living-beings.Jean Chaline - 2010 - Foundations of Science 15 (3):279-302.
    We have demonstrated, using the Cantor dust method, that the statistical distribution of appearance and disappearance of rodents species (Arvicolid rodent radiation in Europe) follows power laws strengthening the evidence for a fractal structure set. Self-similar laws have been used as model for the description of a huge number of biological systems. With Nottale we have shown that log-periodic behaviors of acceleration or deceleration can be applied to branching macroevolution, to the time sequences of major evolutionary leaps (global life tree, (...)
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  • Language Acquisition and EcoDevo Processes: The Case of the Lexicon-Syntax Interface.Sergio Balari, Guillermo Lorenzo & Sonia E. Sultan - 2020 - Biological Theory 15 (3):148-160.
    Ecological developmental biology considers the phenotype as actively produced through an environmentally informed process of individual development, rather than predetermined by the genotype. Accordingly, the genotype is viewed as one among many interactants that contribute formative elements; it is understood to do so no differently from the way other organism-internal and environmental resources do. Although the EcoDevo approach is evidently particularly apt to inform approaches to human development, which mostly takes shape in rich cultural environments, it is remarkable that, at (...)
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  • The Poetics of Purpose.Victoria N. Alexander - 2009 - Biosemiotics 2 (1):77-100.
    Hackles have been raised in biosemiotic circles by T. L. Short’s assertion that semiosis, as defined by Peirce, entails “acting for purposes” and therefore is not found below the level of the organism (2007a:174–177). This paper examines Short’s teleology and theory of purposeful behavior and offers a remedy to the disagreement. Remediation becomes possible when the issue is reframed in the terms of the complexity sciences, which allows intentionality to be understood as the interplay between local and global aspects of (...)
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  • Explanatory Internalism: Challenging Selected-Effect Functions (prerpint).Tiago Rama - manuscript
    Explanatory Externalism states that the only adaptive force in evolution is natural selection. Explanatory Externalism is a central thesis of the Modern Evolutionary Synthesis. The etiological theory of natural selected-effect functions also advocates Explanatory Externalism. According to this theory, natural selection is the process responsible for determining the proper natural functions of traits. However, I will point out several challenges to Explanatory Externalism that are proposed primarily by developmental biology and its various subfields. Based on these challenges, this paper will (...)
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  • Two Sources of Knowledge: Origin and Generation of Knowledge in Maine de Biran and Henri Bergson.Lauri Myllymaa - 2021 - Dissertation, University of Jyväskylä
    It is important for the theory of knowledge to understand the factors involved in the generation of the capacities of knowledge. In the history of modern philosophy, knowledge is generally held to originate in either one or two sources, and the debates about these sources between philosophers have concerned their existence, or legitimacy. Furthermore, some philosophers have advocated scepticism about the human capacity to understand the origins of knowledge altogether. However, the developmental aspects of knowledge have received relatively little attention (...)
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  • Metaphors as surrogate variables. The case of adaptive radiation.Alfonso Arroyo-Santos & Mark E. Olson - manuscript
    We develop a new metaphor account where metaphors become surrogate variables for different but related phenomena. As we will argue, subrogation is the result of the interplay between the things inspired by the metaphor and the empirical dynamics that result from such inspiration. In particular, we focus on adaptive radiation, a major concept of evolutionary biology. Our study suggests that there is no distinct phenomenon, process, or pattern in nature than can be identified as adaptive radiation. What we have instead (...)
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