The relational structure of RNA, DNA, and protein bears an interesting similarity to the determination problem in category theory. In this paper, we present this deep-structure similarity and use it as a springboard for discussing some abstract properties of coding in various systems. These abstract properties, in turn, may shed light on the evolution of the DNA world from a semiotic perspective. According to the perspective adopted in this paper, living systems are not information processing systems but “meaning-making” systems. Therefore, (...) what flows in the genetic system is not “information” but “value.” We define meaning, meaning-making, and value and then use these terms to explain the abstract dynamics of coding, which can illuminate many forms of sign-mediated activities in biosystems. (shrink)

The time-honored questions concerning the meaning and significance of life should be discussed not only in the light of various philosophical and literary considerations but also from the natural scientific perspectives as human beings are conditioned parts of nature as a whole. Hence, in this paper, I discuss these questions from the perspectives of two major and universal scientific fields, namely, generalized crystallography and quantum mechanics. On the philosophical grounds, the question of the meaning and, especially, the significance of life (...) should be focused on the assumption that each human being is a singular individual whose significance is universal. Such a philosophical approach is compatible with the two above-mentioned natural scientific aspects. (shrink)

Reductionism has dominated science and philosophy for centuries. Complexity has recently shown that interactions—which reductionism neglects—are relevant for understanding phenomena. When interactions are considered, reductionism becomes limited in several aspects. In this paper, I argue that interactions imply nonreductionism, non-materialism, non-predictability, non-Platonism, and non-Nihilism. As alternatives to each of these, holism, informism, adaptation, contextuality, and meaningfulness are put forward, respectively. A worldview that includes interactions not only describes better our world, but can help to solve many open scientific, philosophical, and (...) social problems caused by implications of reductionism. (shrink)

[Przekład] Ja immunologiczne jest naszym zreifikowanym opisem procesów, dzięki którym układ odpornościowy utrzymuje wyodrębnioną tożsamość organizmu i siebie samego. Jest to proces interpretacyjny, i żeby badać go w sposób naukowo konstruktywny, powinniśmy połączyć długoletnią hermeneutyczną tradycję pytania o naturę interpretacji ze współczesnym rozumieniem układu odpornościowego, pojawiającymi się technologiami badawczymi oraz zaawansowanymi narzędziami obliczeniowymi analizującymi dane sensoryczne.