This article deals with a type of functional explanation, viability explanation, that has been overlooked in recent philosophy of science. Viability explanations relate traits of organisms and their environments in terms of what an individual needs to survive and reproduce. I show that viability explanations are neither causal nor historical and that, therefore, they should be accounted for as a distinct type of explanation.

This paper reviews the debate on the notion of biological function and on functional explanation as this takes place in philosophy. It describes the different perspectives, issues, intuitions, theories and arguments that have emerged. The author shows that the debate has been too heavily influenced by the concerns of a naturalistic philosophy of mind and argues that in order to improve our understanding of biology the attention should be shifted from the study of intuitions to the study of the actual (...) practice of biological inquiry. (shrink)

I argue that there are at least four different ways in which the term ‘function’ is used in connection with the study of living organisms, namely: function as activity, function as biological role, function as biological advantage, and function as selected effect. Notion refers to what an item does by itself; refers to the contribution of an item or activity to a complex activity or capacity of an organism; refers to the value for the organism of an item having a (...) certain character rather than another; refers to the way in which a trait acquired and has maintained its current share in the population. The recognition of a separate notion of function as biological advantage solves the problem of the indeterminate reference situation that has been raised against a counterfactual analysis of function, and emphasizes the importance of counterfactual comparison in the explanatory practice of organismal biology. This reveals a neglected problem in the philosophy of biology, namely that of accounting for the insights provided by counterfactual comparison. (shrink)

I argue that there are at least four different ways in which the term ‘function’ is used in connection with the study of living organisms, namely: function as activity, function as biological role, function as biological advantage, and function as selected effect. Notion refers to what an item does by itself; refers to the contribution of an item or activity to a complex activity or capacity of an organism; refers to the value for the organism of an item having a (...) certain character rather than another; refers to the way in which a trait acquired and has maintained its current share in the population. The recognition of a separate notion of function as biological advantage solves the problem of the indeterminate reference situation that has been raised against a counterfactual analysis of function, and emphasizes the importance of counterfactual comparison in the explanatory practice of organismal biology. This reveals a neglected problem in the philosophy of biology, namely that of accounting for the insights provided by counterfactual comparison. (shrink)

In this paper, I develop and defend a theory of what I call 'implicit goal-directedness', which is a purely causal or dynamical notion, and can be separated from the notion of 'explicit goal-directedness', which implies the representation of a goal-state. I describe the problems that plagued earlier attempts at analyzing goal-directedness in causal/dynamical terms, and then present my own novel solution. I argue that implicit goal-directedness, in the sense presented, plays an important conceptual role in biology and cognitive science, and (...) is distinct, not only from explicit goal-directedness, but also from the other major teleological notion familiar to philosophers of biology: evolutionary function. Indeed, an appreciation of this tripartite distinction is critical for understanding the structure of explanations of behavior in many scientific contexts. (shrink)

"Modern History" versions of the etiological theory claim that in order for a trait X to have the proper function F, individuals with X must have been recently favored by natural selection for doing F (Godfrey-Smith 1994; Griffiths 1992, 1993). For many traits with prototypical proper functions, however, such recent selection may not have occurred: traits may have been maintained due to lack of variation or due to selection for other effects. I examine this flaw in Modern History accounts and (...) offer an alternative etiological theory, the Continuing Usefulness account, which appears to avoid such problems. (shrink)

There is a conceptual crisis in the biomedical sciences that is particularly salient in psychopathology research. Underlying the crisis is a controversy that pertains to the current medical model of disease that largely draws from causal-mechanistic explanations. The bedrock of this model is the analysis of biological part-dysfunctions that aims at unequivocally defining a pathological condition and demarcating it from its neighboring entities. This endeavor has led to a quest for physiological, biochemical, and genetic signatures. Yet, so far there is (...) little evidence for reliable biomarkers for any mental disorder. The contemporary biomedical paradigm largely ignores historical, dynamic, and system-level aspects—a view that has contributed much to the conceptual disjunction of the patient as a person from his/her disease. Notwithstanding the impressive progress in the biomedical sciences, increasingly more critics question whether the constituting framework is sufficient to convey a comprehensive understanding of illnesses, especially mental illnesses. Thus, the medical model urgently requires an update. But rather than revamping it by methodological advancements, it will be necessary to critically review its philosophical roots. The most problematic issues that require reworking are: the preponderance of the biostatistical theory; the undue decoupling of physiological from evolutionary explanations of function; the clinging to the Modern Synthesis ; and the neglect of dynamic and system-level properties. The proposed overhaul requires the heeding of historical explanations that draw from the Extended Evolutionary Synthesis as well as systems biology approaches for tackling multilevel and dynamic phenomena of complex systems. (shrink)

There is a conceptual crisis in the biomedical sciences that is particularly salient in psychopathology research. Underlying the crisis is a controversy that pertains to the current medical model of disease that largely draws from causal-mechanistic explanations. The bedrock of this model is the analysis of biological part-dysfunctions that aims at unequivocally defining a pathological condition and demarcating it from its neighboring entities. This endeavor has led to a quest for physiological, biochemical, and genetic signatures. Yet, so far there is (...) little evidence for reliable biomarkers for any mental disorder. The contemporary biomedical paradigm largely ignores historical, dynamic, and system-level aspects—a view that has contributed much to the conceptual disjunction of the patient as a person from his/her disease. Notwithstanding the impressive progress in the biomedical sciences, increasingly more critics question whether the constituting framework is sufficient to convey a comprehensive understanding of illnesses, especially mental illnesses. Thus, the medical model urgently requires an update. But rather than revamping it by methodological advancements, it will be necessary to critically review its philosophical roots. The most problematic issues that require reworking are: the preponderance of the biostatistical theory; the undue decoupling of physiological from evolutionary explanations of function; the clinging to the Modern Synthesis ; and the neglect of dynamic and system-level properties. The proposed overhaul requires the heeding of historical explanations that draw from the Extended Evolutionary Synthesis as well as systems biology approaches for tackling multilevel and dynamic phenomena of complex systems. (shrink)

In this essay I will argue that natural selection is more important to functional explanations than what has been thought in some of the literature in philosophy of biology. I start by giving a brief overview of the two paradigms cases of functional explanations: etiological functions and causal-role functions. i then consider one particular attempt to conciliate both perspectives given by David Buller. Buller's trial to conciliate both etiological functions and causal-role functions results in what he calls a weak etiological (...) theory. I argue that Buller has not succeeded in his construal of the weak etiological theory: he underestimates the role that selective processes have in functional explanations and so his theory may not be classified as an etiologial theory. As an alternative, I consider the account of etiological functions given by Ruth Millikan and I argue that Millikan's theory is more comprehensive to assess contentious case in biology like exaptations. Finally, I conclude by analyzing where the adoption of Millikan's theory leave us. I argue, contrary to Millikan and others, that once we assume the importance of natural selection in functional explanations, there is no strong reason to resist a linguistic reform of the word function and hence that the attempts to conciliate both etiological functions and causal-role functions are misplaced. (shrink)

Kenneth Schaffner has argued that evolutionary theory, strictly understood, cannot support the functional ascriptions used in adaptational functional explanations. Although the causal ascription clause in these ascriptions is supported, the goal-ascription clause cannot be, since it imports anthropocentric features deriving from a vulgar understanding of evolutionary theory. I argue that an etiological interpretation of selectional explanations sanctions both the causal and goal-ascription clauses of functional ascriptions and provides a way to understand teleological explanation within evolutionary biology.

In this article I elaborate a scientifically based moral realism that I call affordance moral realism, and I offer a promissory note that affordance moral realism is the best current explanation of morality. Affordance moral realism maintains that morality is constituted by the interaction of moral agents and moral affordances. The latter are the natural and social environments in which moral agents’ activities take place and contain the objects of moral agents’ activities whose actualizations are the manifestation of substantive moral (...) goods. In making this argument, I take a scientific naturalistic approach that includes both the natural and social sciences, aiming to make my account both methodologically and substantively naturalistic. On the subject side of my affordance view, I offer a scientific account of moral agency, one based on an extension of social cognitive theories of agency to the realm of morality. And I argue that affordance moral realism explains the nature of moral agency, its acquisition, maintenance, and successful performance. To explain its origin and maintenance, I make use of a general theory of selection that embraces biological, social, cultural, and intentional selection. On the object side, I offer a theory of moral affordances and their actualizations, employing the findings and theories of moral developmental psychology and moral psychology to understand their actualizations through the successful operations of moral agents. I conclude that a scientifically based naturalistic affordance moral realism promises to provide the best current account of morality. It is not only affordable; it’s a bargain. (shrink)

On dit souvent que, tandis que la biologie de l'évolution utilise un concept étiologique de fonction (la fonction d'un trait biologique n'est autre que son effet sélectionné), la physiologie prend appui sur un autre concept de fonction, celui de rôle causal. Cependant, un examen plus attentif montre que le concept non normatif de rôle causal n'est pas ce dont la physiologie générale ou la neurophysiologie ont besoin. Ces disciplines font un large usage de notions comme celles de bon fonctionnement, de (...) fonctionnement normal, de fonctionnement perturbé ou de trouble fonctionnel. Il semble ainsi qu'un concept normatif comme le concept étiologique n'est pas seulement utile dans le contexte d'explications téléologiques ou évolutionnistes, mais aussi dans celui d'explications mécanistes ou opérationnelles telles qu'elles sont couramment proposées par la physiologie. La différence entre types d'explication n'est pas une différence entre deux concepts de fonction. En particulier, l'analyse physiologique serait une tâche impossible si elle devait prendre en compte toutes les relations causales à l'intérieur de l'organisation fonctionnelle de chaque système biologique. Pour résoudre ce problème, la physiologie doit être une analyse du fonctionnement normal du système, quelle que soit la part d'idéalisation nécessaire. La notion de bon fonctionnement, conçu comme le produit de l'histoire évolutive, nous aide en particulier à comprendre pourquoi les systèmes qui fonctionnent bien se ressemblent, et pourquoi les systèmes qui dysfonctionnent peuvent le faire de tant de façons différentes. It is often claimed that although evolutionary biology uses an etiological concept of function (according to etiological theory, the function of a biological feature is its selected effect), physiology relies on a different concept of function, the causal role concept. However, upon closer scrutiny, it appears that the non-normative causal role concept is not what is needed by physiology or neurophysiology. These disciplines make a wide use of normative notions like proper functioning, normal functioning, impaired functioning, or functional disorders. In this case, it seems that a normative concept like the etiological concept is not only useful in the context of teleological or evolutionary explanations, but also in the context of mechanical or operational explanations as they are routinely offered by physiology. The difference between types of explanations is not a difference between two kinds of concepts of function. In particular, physiological analysis would be an impossible task if it had to take into account all causal links within the functional organization of each biological system. To solve this problem, physiology has to be the analysis of the proper or normal functioning of the system, even if normal functioning is usually obtained through a process of idealization. The notion of proper functioning, conceived as the product of evolutionary history, helps us understand, among other things, why properly functioning systems tend to be similar, and why malfunctioning systems may differ in so many different ways. (shrink)

This paper argues that a minimal notion of function and a notion of normal-proper function are used in explaining how bodies and brains operate. Neither is Cummins’ notion, as originally defined, and yet his is often taken to be the clearly relevant notion for such an explanatory context. This paper also explains how adverting to normal-proper functions, even if these are selected functions, can play a significant scientific role in the operational explanations of complex systems that physiologists and neurophysiologists provide, (...) despite a lack of relevant causal efficacy on the part of such functions. (shrink)

Two concepts have polarized the philosophical debates on functions since the 1970s. One is Millikan's concept of ‘proper function’, meant to capture the aetiology of biological organs and artefacts. The other is Cummins's concept of ‘dispositional function’, designed to account for the real work that functional devices perform within a system. In this paper I locate Hegel's concept of biological function in the context of those debates. Admittedly, Hegel's concept is ‘etiological’, since in his account the existence of purposive organs (...) is explained by appeal to their purpose, yet, against Millikan's concept, Hegel's does not presuppose the phenomenon of natural selection nor derives the function of tokens from the function of types. So, my aim is, first, to present Hegel's approach to biological functions as one neither purely etiological nor purely dispositional. It will appear rather as an example of an organizational account, that attributes function according to present performances and emphasizes the role of functional parts in their self-production within the system they belong to. Finally, I briefly discuss how Hegel's concept performs against common objections to organizational accounts. (shrink)

This article is the sequel to 'Intentionality and Modern philosophical psychology, I. The modern reduction of intentionality,' (Philosophical Psychology, 3 (2), 1990) which examined the view of intentionality pioneered by Carnap and reaching its apotheosis in the work of Daniel Dennett. In 'Intentionality and modem philosophical psychology, II. The return to representation' (Philosophical Psychology, 4(1), 1991) I examined the approach to intentionality which can be traced back to the work of Noam Chomsky but which has been given its canonical treatment (...) in the work of Jerry Fodor. In this article, the last in the series, I explore a very recent approach to intentionality which has been associated especially with the work of Ruth Garrett Millikan and Colin McGinn, and might, if the phrase were not so rebarbative, be called “the biologizing of intentionality'. (shrink)

Arguably, the most widely endorsed account of normative functions in philosophy of biology is an etiological theory that holds that the function of current traits is fixed by the past selection history of other traits of that type. The earlier formulations of this “selected-effects” theory had trouble accommodating vestigial traits. In order to remedy these difficulties, the influential recent selection or modern history selected-effects theory was introduced. This paper expands upon and strengthens the argument that this theory has trouble stemming (...) from recent “no variation” cases. In addition, several influential arguments for the necessity of including a selection requirement in a theory of normative biological functions are contested. It is suggested that accounting for biological functions in certain areas of biology does not require adverting to selection. (shrink)

Teleosemantics is a naturalistic research programme in the philosophy of mind and language. Its ambition is to achieve a reduction, first, of mental content to teleological function; second, of teleological function to non-teleological notions. This article explores the second step, particularly as envisaged by Millikan’s etiological theory of function.

The parts-based engineering approach in synthetic biology aims to create pre-characterised biological parts that can be used for the rational design of novel functional systems. Given the context-sensitivity of biological entities, a key question synthetic biologists have to address is what properties these parts should have so that they give a predictable output even when they are used in different contexts. In the first part of this paper I will analyse some of the answers that synthetic biologists have given to (...) this question and claim that the focus of these answers on parts and their properties does not allow us to tackle the problem of context-sensitivity. In the second part of the paper, I will argue that we might have to abandon the notions of parts and their properties in order to understand how independence in biology could be achieved. Using Robert Cummins’ account of functional analysis, I will then develop the notion of a capacity and its condition space and show how these notions can help to tackle the problem of context-sensitivity in biology. (shrink)

We argue that ecology in general and biodiversity and ecosystem function research in particular need an understanding of functions which is both ahistorical and evolutionarily grounded. A natural candidate in this context is Bigelow and Pargetter’s evolutionary forward-looking account which, like the causal role account, assigns functions to parts of integrated systems regardless of their past history, but supplements this with an evolutionary dimension that relates functions to their bearers’ ability to thrive and perpetuate themselves. While Bigelow and Pargetter’s account (...) focused on functional organization at the level of organisms, we argue that such an account can be extended to functional organization at the community and ecosystem levels in a way that broadens the scope of the reconciliation between ecosystem ecology and evolutionary biology envisioned by many BEF researchers. By linking an evolutionary forward-looking account of functions to the persistence-based understanding of evolution defended by Bouchard and others, and to the theoretical research on complex adaptive systems, we argue that ecosystems, by forming more or less resilient assemblages, can evolve even while they do not reproduce and form lineages. We thus propose a Persistence Enhancing Propensity account of role functions in ecology to account for this overlap of evolutionary and ecological processes. (shrink)

In the course of investigating the living world, biologists regularly attribute semantic content to the phenomena they study. In this paper, I examine the case of a contemporary research program studying the navigation behaviors of ants and develop an account of the norms governing researchers’ ascriptions of semantic content in their research practices. The account holds that researchers assign semantic content to behaviors that reliably achieve a difficult goal-directed function, and it also suggests a productive role for attributions of semantic (...) content in the process of animal behavior research. (shrink)

In 1965, Konrad Lorenz grounded the innate–acquired distinction in what he believed were the only two possible sources of information that can underlie adaptedness: phylogenetic and individual experience. Phylogenetic experience accumulates in the genome by the process of natural selection. Individual experience is acquired ontogenetically through interacting with the environment during the organism’s lifetime. According to Lorenz, the adaptive information underlying innate traits is stored in the genome. Lorenz erred in arguing that genetic adaptation is the only means of accumulating (...) information in phylogenetic experience. Cultural adaptation also occurs over a phylogenetic time scale, and cultural tradition is a third source from which adaptive information can be extracted. This paper argues that genetic adaptation can be distinguished from individual and cultural adaptation in a species like Homo sapiens, in which even adaptations with a genetic component require cultural inputs and scaffolding to develop and be expressed. Examination of the way in which innateness is used in science suggests that scientists use the term, as Lorenz suggested, to designate genetic adaptations. The search for innate traits plays an essential role in generating hypotheses in ethology and psychology. In addition, designating a trait as innate establishes important facts that apply at the information-processing level of description. (shrink)

The function of concepts must be taken seriously to understand the scientific practices of developing and working with concepts. Despite its significance, little philosophical attention has been paid to the function of concepts. A notable exception is Brigandt (2010), who suggests incorporating the epistemic goal pursued with the concept’s use as an additional semantic property along with the reference and inferential role. The suggestion, however, has at least two limitations. First, his proposal to introduce epistemic goals as the third component (...) of concepts lacks independent grounding, except to account for the rationality of semantic change (the Grounding Problem). Second, it is hardly justified to consider epistemic goals as a semantic property (the Misplacement Problem). To remedy these predicaments, we suggest a new perspective that takes concepts as cognitive entities with a 2-layered structure rather than as merely linguistic entities and develop an account of the function of concepts. We provide empirical evidence showing that functional information affects our cognitive processes. It is claimed that the function of concepts is not a semantic property but a type of meta-information regulating a body of concept-constitutive information. (shrink)

Formulations of the essential commitment of the etiological theory of functions have varied significantly, with some individual authors' formulations even varying from one place to another. The logical geography of these various formulations is different from what is standardly assumed; for they are not stylistic variants of the same essential commitment, but stylistic variants of two non-equivalent versions of the etiological theory. I distinguish these “strong” and “weak” versions of the etiological theory (which differ with respect to the role of (...) selection in their definitions of function), draw out their respective implications, and argue that the weak version is to be preferred to the strong. (shrink)

The extensive philosophical discussions and analyses in recent decades of function-talk in biology have done much to clarify what biologists mean when they ascribe functions to traits, but the basic metaphysical question—is there genuine teleology and design in the natural world, or only the appearance of this?—has persisted, as recent work both defending, and attacking, teleology from a Darwinian perspective, attest. I argue that in the context of standard contemporary evolutionary theory, this is for the most part a verbal, rather (...) than a substantive dispute: the disputants are talking past one another. To justify this claim I develop a general framework within which reductionist views, such as the standard ‘etiological’ account of biofunctions, occupy an intermediate position between what I call full-blooded realism and full-blooded anti-realism, and suggest that whether such views count as ‘realist’ views has no objective, theory-neutral answer. (shrink)

Recently something close to a consensus about the best way to naturalize the notion of biological function appears to be emerging. Nonetheless, teleological notions in biology remain controversial. In this paper we provide a naturalistic analysis for the notion of natural design. Many authors assume that natural design should be assimilated directly to function. Others find the notion problematic because it suggests that evolution is a directed process. We argue that both of these views are mistaken. Our naturalistic account does (...) not simply equate design with function. We argue that the distinction between function and design is important for understanding the evolution of the physical and behavioral traits of organisms. (shrink)