Some recent philosophers of science have argued that chemistry in the nineteenth century “largely lacked theoretical foundations, and showed little progress in supplying such foundations” until around 1900, or even later. In particular, nineteenth-century atomic theory, it is said, “played no useful part” in the crowning achievement of nineteenth-century chemistry, the powerful subdiscipline of organic chemistry. This paper offers a contrary view. The idea that chemistry only gained useful theoretical foundations when it began to merge with physics, it will be (...) argued, is based on an implicit conception of scientific theory that is too narrow, and too exclusively oriented to the science of physics. A broader understanding of scientific theory, and one that is more appropriate to the science of chemistry, reveals the essential part that theory played in the development of chemistry in the nineteenth century. It also offers implications for our understanding of the nature of chemical theory today. (shrink)