Theistic Indian Philosophy

This open access book presents a comparative study of two classics of world literature, offering the first sustained study of what unites and divides the Nicomachean Ethics and the Bhagavad Gita. -/- Asking what the texts think is the nature of moral action and how it relates to the highest good, Roopen Majithia shows how the Gita stresses the objectivity of knowledge and freedom from being a subject, while the Ethics emphasizes the knower, working out Aristotle’s central commitment to the (...) idea of substance as the primary building block of the world. Yet both the Gita and the Ethics explain variety in human behaviour in terms of three driving forces. Both agree moral agency is a construct that is a function of background, education and habit, presupposing a cultural, political and economic infrastructure. -/- What distinguishes the texts is how the content of right action is generated. Reading them together, alert to their individual accounts of how the practical relates to the reflective dimensions of life, Majithaia enriches our understanding of two cornerstone texts in the Greek and Indian philosophical traditions. -/- The ebook editions of this book are available open access under a CC BY-NC-ND 4.0 licence on bloomsburycollectionsdotcom. Open access was funded by The Marjorie Young Bell Faculty Fund and The Hart Almerrin Massey Endowment. (shrink)

We shall revisit a debate which has been going on at least since pioneering British Indologists like William Jones first encountered the ‘Brahmanic theology’ we now know as Vedānta, namely, the nature of the relationship—if any—between certain forms of ‘western’ and ‘Indian’ idealisms, and how these metaphysical systems have influenced Christian theology. Specifically, we look at the question of possible thematic and conceptual convergences between Neoplatonism and Advaita Vedānta, and argue that significant parallels can be found in their common conception (...) of the Absolute as Being. Rather than attempt a comprehensive overview of the two systems, we take the divine ‘I AM’ revealed to Moses in Exodus 3.14 as the locus classicus of Christian philosophical interpretations of God as Being itself, and explore how four seminal figures read this passage in light of Neoplatonic and Vedāntic influences. We shall see that similarities and divergences in the readings of Augustine, Thomas Aquinas, Meister Eckhart and Henri Le Saux can be understood in terms of how they negotiate the relation between the One and the many, or between ‘being’ and ‘knowing’. The more these figures allow themselves to be influenced by Neoplatonism and Advaita Vedānta, the more we see any clear ontological distinction between creature and Creator start to break down. This verse, therefore, proves to be an unusually fruitful test case for exploring the relation between the underlying Neoplatonic and Vedāntic metaphysics which structure varying Christian interpretations of it. (shrink)

In this paper, my objective is to show how Sankarāchārya's concept of reality is deferent from the Kantian notion of reality, despite many similarities between them. Cartesian skepticism of universal doubt is a challenge for the Kantian notion of reality; however, it can't be applied to Sankarāchārya's concept of reality because of the acceptance of different paradigm to explain the reality and Sankarāchārya's non-representationalistic approach towards the reality. The attack on representationalism can't be applicable to Sankarāchārya's philosophy.

Although Indic perspectives toward nature are now well documented, climate engineering discussions seem to still lack the views from Indic or other non‐Western sources. In this article, I will apply some of the Hindu and Jain concepts such as karma, nonviolence (Ahiṃsā ), humility (Vinaya ), and renunciation (Saṃnyāsa ) to analyze the two primary climate geoengineering strategies of solar radiation management (SRM) and carbon dioxide removal (CDR). I suggest that Indic philosophical and religious traditions such as Hinduism, Buddhism, and (...) Jainism offer ethical concepts to call for humility in all acts of climate engineering leading to a favoring of CDR over SRM and a favoring of lifestyle changes (particularly vegetarianism) over both. I demonstrate these concepts by introducing the five great elements from the Hindu philosophy, two Hindu legends from Hindu mythology, the Indic ethical ideas of karma, renunciation, and humility, and the moral authority of Gandhi. (shrink)

After decades of imperfect secularism, presided over by an often corrupt Congress establishment, Nehru's diverse republic has yielded to Hindu nationalism. India is collapsing under the weight of its own contradictions. Since 2014, the ruling BJP has unleashed forces that are irreversibly transforming the country. Indian democracy, honed over decades, is now the chief enabler of Hindu extremism. Bigotry has been ennobled as a healthy form of self-assertion, and anti-Muslim vitriol has deluged the mainstream, with religious minorities living in terror (...) of a vengeful majority. Congress now mimics Modi; other parties pray for a miracle. In this blistering critique of India from Indira Gandhi to the present, Komireddi lays bare the cowardly concessions to the Hindu right, convenient distortions of India's past and demeaning bribes to minorities that led to Modi's decisive electoral victory. If secularists fail to reclaim the republic from Hindu nationalists, Komireddi argues, India will become Pakistan by another name. (shrink)

Chakravarthi Ram-Prasad's delightful and challenging little book does not fit easily into the standard categories available for academic excursions into philosophy. It is, to simplify, a venture in constructive philosophical theology, centered on questions of being and selfhood, which takes the form of a reflection upon the Bhagavad-gītā commentaries written by two of India's leading philosopher/theologians, Śaṅkara (c. 8th century CE) and Rāmānuja (c. 11th century CE). While Ram-Prasad does try to argue for the best readings of Śaṅkara and Rāmānuja, (...) the book should not be misunderstood as a "merely" historical work. Ram-Prasad looks to the classical thinkers, and indeed the ancient text of the Bhagavad-gītā itself, for enduring insights into the nature of being. It speaks to a number of sub-disciplines within philosophy, including metaphysics, history of philosophy, Indian philosophy, philosophy of religion, and comparative philosophy/theology. (shrink)

Seminar papers; Study with special reference to Advaita philosophy of Śaṅkarācārya.

pt. 1. Philosophy of nature.--pt. 2. The philosophy of truth & falsehood.-- pt. 4. Study of & infra-human relationships.

Study in the context of the Hindu philosophical system, with special reference to Vedanta.

Indian Christian thinkers have responded both negatively and positively to the diverse schools of Indian Philosophy. It is the contention of this work that the negative responses alone will stand out in history in the reconstruction of Indian Christian thought. Also, Indian Christian thought developed in terms of the contributions of Indian philosophical schools can be first step in the articulation of an Indian Christian philosophy.

It Also Demonstrates The Possibility Of Discovering The Indian Christian Pramanas From These Six Indian Philosophical Pramanas, Without Reinterpreting Or Rejecting Any Of Them So That An Authentic Theological Method Is Arrived At.

Papers presented at a three-day National Symposium on Christian Contribution to Indian Philosophy from 1st to 3rd March 1994 and jointly organized by Indian Council of Philosophical Research and Satya Nilayam Research Institute.

Discussion of salvation by self-knowledge in Yemeni-Jewish philosophy, and possible sources in Avicennan, Ishraqi, and Indian texts.

In the Āgamaḍambara (‘Much Ado About Religion’), Bhaṭṭa Jayanta presents an argument for an inclusivist approach to the problem of religious diversity, building upon some of the arguments given in his Nyāyamañjarī. Although his arguments are restricted to consideration of a form of Hinduism particular in time and place, I argue that Jayanta’s solution to the problem of religious diversity has wide-ranging relevance and some applicability to contemporary debates in the philosophy of religion. I consider possible pluralist objections to inclusivism, (...) such as those given by John Hick in An Interpretation of Religion and elsewhere. In response to these objections, I argue that an inclusivism like Jayanta’s addresses all the reasons someone might have for adopting a pluralist position and in fact does so better than the pluralists by remaining within a live religious tradition. (shrink)

This paper examines the concept of manifestation process in Kashmir Shaivism from Shiva tattva to Prithvi tattva and their transcendental and immanent predicates (Prakrti and Purusa).This paper also shows that the ultimate reality, Paramshiva, manifests itself into various forms which likely represent the theory of causation. This research paper also provides answer to two questions; First, how ultimate reality with its thirty-six principles or elements manifest in various forms and what types of forms ‘Descent’ attains from the ‘universal self’? Second, (...) how manifestation process takes place from the ‘cosmic self’ (universal consciousness) to a ‘limited self’ (Jiva)? Since, this paper is based on philosophical exploration of manifestation process and contains interpretation and argumentation of Pratyabhijna philosophy only; it excludes manifestation due to Yogas (Upayas) and Karmas. Moreover, it explains the Trika form of reality (Shiva/God, Shakti/World, and Nara/Man) and also the identity between ‘ascent’ and ‘descent’. Manifestation further investigates the union of Shiva and Shakti with Maya and displays its character (Prakashvimarshmaya). This work further tries to describe the contribution of Abhinavagupta in the concept of manifestation. (shrink)

This reviewer had earlier had the misfortune of reviewing Sarah Jacoby's puerile book on Sera Khandro for Prabuddha Bharata. Jacoby had nearly made this reviewer puke. Same is the case with Bihani Sarkar's monograph. On the basis of this monograph she might win academic brownie points but it is a study which should have been dumped. The existence of the monograph is not only an insult to Hinduism and the Sanatana Dharma; it is technically wrong in its structuralist, iterative hermeneutics (...) which derives from the likes of Mircea Eliade. The reviewer knows that Sarkar will one day be a biggie in the first world peddling Hinduism ; she should have confined herself only to Sanskrit literature and not try to pass herself as a (faux) Hindu theologian. This book does no credit to the publisher. (shrink)

The SAIVA SIDDHANTHA sastra texts are not studied in debth and the interpretation varies from author to author on many issues. Besides the contemporary trends like hermeneutical and psycho-analytical interpretation are not done yet in the sastra texts. -/- A scientific study of the philosophy of the saiva doctrines especially the core philosophy is my aim. Traditional way to describe them would be to take up the three core issues of the saivite ontology that are the pathi, pasu and pasam. (...) -/- I have taken up the psychological analysis of these core issues. In addition the iruvinai oppu,malaparibaham and sakthinibatham aspects were compared with analytic connotations. The nittai theories and the sadhana aspects were compared with the modern insight and psychotherapy. The dheekai methods which are very much close to the psychotherapist’s style is also disussed in the last. -/- I have taken thiruvasagam,thirumandhitam and periyapuranam among the thirumurai texts. As for as the sandhana texts I have taken sivagnanabodham and sivagnanasiddhiyar. Among the pandara texts I have studied dhaskariam,panchkra pahrodai and nittai vilakkam. Besides these I have taken a few quotes from vallalar’s thiru-arutpa. -/- . (shrink)

Tripura Upanishad is a minor Shakta or Tantra Upanishad explaining the structure of and meditation on Sri Chakra or Sri Yantra—a diagrammatic representation of the universe through nine interlocking triangles coming out of a central point. To date, there are two English translations of this Upanishad. The first and the earliest, by A G Krishna Warrier done in 1967, is a verse translation and because of the obvious constraints of such translation, fails to explain the intricacies and implied meanings of (...) this cryptic Upanishad. The second translation done many years later, is by Douglas Renfrew Brooks, who has also beautifully translated the commentary on this Upanishad by Bhaskararaya in the book 'The Secret of the Three Cities' published by the University of Chicago Press in 1990. While maintaining a high level of accuracy and bringing out the intricate nuances of this Upanishad, the emphasis of Brooks' translation seems to be more on the geometrical aspects of the Sri Chakra. The present translation emphasises the practice aspect of this Upanishad as derived from Bhaskararaya's commentary. (shrink)

The notion of maximal greatness is arguably part of the very concept of God: something greater than God is not even possible. But how should we understand this notion? The aim of this paper is to provide a Śaivist answer to this question by analyzing the form of theism advocated in the Pratyabhijñā tradition. First, I extract a model of divine greatness, the Hierarchical Model, from Nagasawa’s work "Maximal God". According to the Hierarchical Model, God is that than which nothing (...) could be greater by virtue of being better suited than all other beings in relation to certain great-making properties (§1). I then offer an analysis of the form of theism advocated in the Pratyabhijñā tradition by discussing passages from the works of Somānanda, the founder of the Pratyabhijñā school, and of Utpaladeva, the most prominent of Somānanda’s disciples. I argue that the Pratyabhijñā theist cannot account for divine greatness in terms of the Hierarchical Model. My argument is that the Hierarchical Model requires a comparison between God and other beings that cannot be made with the Pratyabhijñā God (§2). Finally, I develop an original alternative model, the Unlimited Nature Model, that accounts for God’s maximal greatness in a way that suits Pratyabhijñā’s theism. According to the Unlimited Nature Model, the nature of all ordinary beings is metaphysically limited as a result of realizing only a small portion of the potential of what could be, and God is maximally great because only he has a completely unlimited nature (§3). (shrink)

This article is the SIXTH of several excerpts from my book The Nondual Mind: Vedānta, Kashmiri Pratyabhijñā Shaivism, and Spinoza (the full book is posted on this site). “I liked James H. Cumming’s The Nondual Mind a lot. It is beautifully written, thoughtful, and very clear.” (Prof. Yitzhak Y. Melamed, Charlotte Bloomberg Professor of Philosophy, Johns Hopkins University) “James H. Cumming’s scholarly interpretation of Spinoza’s works, persuasively showing how 17th century European ideas that ushered in the Enlightenment find a precursor (...) in 10th century Kashmir, is a masterpiece of reason and philosophy that will leave the reader with profound thoughts on the meaning of history, God, and life itself. As a senior staff attorney in my chambers for many years at the California Supreme Court and a top scholar of ethics and philosophy of law, Mr. Cumming never ceased to amaze me with his outstanding research and intellect. This scholarly book is a must read for all who want to know why Spinoza continues to influence contemporary philosophy and how his work is still relevant in today’s challenging, interconnected world.” (Hon. Ming W. Chin, Associate Justice (Retired), Supreme Court of California, 1996–2020). (shrink)

This article is the FIFTH of several excerpts from my book The Nondual Mind: Vedānta, Kashmiri Pratyabhijñā Shaivism, and Spinoza (the full book is posted on this site). “I liked James H. Cumming’s The Nondual Mind a lot. It is beautifully written, thoughtful, and very clear.” (Prof. Yitzhak Y. Melamed, Charlotte Bloomberg Professor of Philosophy, Johns Hopkins University) “James H. Cumming’s scholarly interpretation of Spinoza’s works, persuasively showing how 17th century European ideas that ushered in the Enlightenment find a precursor (...) in 10th century Kashmir, is a masterpiece of reason and philosophy that will leave the reader with profound thoughts on the meaning of history, God, and life itself. As a senior staff attorney in my chambers for many years at the California Supreme Court and a top scholar of ethics and philosophy of law, Mr. Cumming never ceased to amaze me with his outstanding research and intellect. This scholarly book is a must read for all who want to know why Spinoza continues to influence contemporary philosophy and how his work is still relevant in today’s challenging, interconnected world.” (Hon. Ming W. Chin, Associate Justice (Retired), Supreme Court of California, 1996–2020). (shrink)

This article is the FOURTH of several excerpts from my book The Nondual Mind: Vedānta, Kashmiri Pratyabhijñā Shaivism, and Spinoza (the full book is posted on this site). “I liked James H. Cumming’s The Nondual Mind a lot. It is beautifully written, thoughtful, and very clear.” (Prof. Yitzhak Y. Melamed, Charlotte Bloomberg Professor of Philosophy, Johns Hopkins University) “James H. Cumming’s scholarly interpretation of Spinoza’s works, persuasively showing how 17th century European ideas that ushered in the Enlightenment find a precursor (...) in 10th century Kashmir, is a masterpiece of reason and philosophy that will leave the reader with profound thoughts on the meaning of history, God, and life itself. As a senior staff attorney in my chambers for many years at the California Supreme Court and a top scholar of ethics and philosophy of law, Mr. Cumming never ceased to amaze me with his outstanding research and intellect. This scholarly book is a must read for all who want to know why Spinoza continues to influence contemporary philosophy and how his work is still relevant in today’s challenging, interconnected world.” (Hon. Ming W. Chin, Associate Justice (Retired), Supreme Court of California, 1996–2020). (shrink)

In the Āgamaḍambara (‘Much Ado About Religion’), Bhaṭṭa Jayanta presents an argument for an inclusivist approach to the problem of religious diversity, building upon some of the arguments given in his Nyāyamañjarī. Although his arguments are restricted to consideration of a form of Hinduism particular in time and place, I argue that Jayanta’s solution to the problem of religious diversity has wide-ranging relevance and some applicability to contemporary debates in the philosophy of religion. I consider possible pluralist objections to inclusivism, (...) such as those given by John Hick in An Interpretation of Religion and elsewhere. In response to these objections, I argue that an inclusivism like Jayanta’s addresses all the reasons someone might have for adopting a pluralist position and in fact does so better than the pluralists by remaining within a live religious tradition. (shrink)

This reviewer had earlier had the misfortune of reviewing Sarah Jacoby's puerile book on Sera Khandro for Prabuddha Bharata. Jacoby had nearly made this reviewer puke. Same is the case with Bihani Sarkar's monograph. On the basis of this monograph she might win academic brownie points but it is a study which should have been dumped. The existence of the monograph is not only an insult to Hinduism and the Sanatana Dharma; it is technically wrong in its structuralist, iterative hermeneutics (...) which derives from the likes of Mircea Eliade. The reviewer knows that Sarkar will one day be a biggie in the first world peddling Hinduism ; she should have confined herself only to Sanskrit literature and not try to pass herself as a (faux) Hindu theologian. This book does no credit to the publisher. (shrink)

This is the conclusion of the hermeneutical problems related to Biblical exegesis. This brief survey concludes with the problematics posed by Object-Oriented Ontology. The limitations of OOO is illustrated with examples from the Kashmiri Trika. Further, we interrogate the Biblical Fall and the story of Yama and Yami. This is part of an ongoing project of Biblical exegesis and this is just the third part of this project.

In this 2nd part of the series on Tantra in this blog, we look at St. Augustine and the Postmoderns like Derrida and John Caputo to gradually frame a hermeneutics of Tantra.

This is what Daniel Simpson has to say of it: An entertaining polemic that takes heartfelt swipes at Western scholars, accusing them of misreading Tantra. "Hinduism is Tantric in essence," the essay says, without proving that Tantra predates other influences, or that "Yoga in its various forms, arises out of Tantra". The latter seems at odds with the earliest descriptions of austerities, or the ascetic objective of bodily transcendence (which Tantric teachings later modified, as evinced by hatha yoga texts). Meanwhile, (...) Patanjali is said to be Tantric because he describes a silent mind - despite not mentioning kundalini (as the author implies). And quoting Abhinavagupta does not mean that Vedanta is based on his framework. Yoga and experiential insight might be inseparable, but a history of ideas can still be written, however tangential it might seem to the practices it alludes to. If "that which is comprehensible is reductionist and is an exercise in structural scrutiny which is disastrous to Indology," then why compose an essay reducing Hinduism to Tantra, while dismissing all else as misguided archiving? Regardless, I enjoyed its invective. (shrink)

This is a review of a classical text of Kashmiri Shaivism.

Tripura Upanishad is a minor Shakta or Tantra Upanishad explaining the structure of and meditation on Sri Chakra or Sri Yantra—a diagrammatic representation of the universe through nine interlocking triangles coming out of a central point. To date, there are two English translations of this Upanishad. The first and the earliest, by A G Krishna Warrier done in 1967, is a verse translation and because of the obvious constraints of such translation, fails to explain the intricacies and implied meanings of (...) this cryptic Upanishad. The second translation done many years later, is by Douglas Renfrew Brooks, who has also beautifully translated the commentary on this Upanishad by Bhaskararaya in the book 'The Secret of the Three Cities' published by the University of Chicago Press in 1990. While maintaining a high level of accuracy and bringing out the intricate nuances of this Upanishad, the emphasis of Brooks' translation seems to be more on the geometrical aspects of the Sri Chakra. The present translation emphasises the practice aspect of this Upanishad as derived from Bhaskararaya's commentary. (shrink)

This chapter considers the problem of divine hiddenness as an issue potentially if not explicitly addressed by the prominent 20th century proponent of Gauḍīya Vaiṣṇavism, A. C. Bhaktivedanta Swami Prabhupāda (1896-1977). In a four-part argument, Prabhupāda’s identifying Kṛṣṇa as the perfect teacher, particularly in his role as Arjuna’s teacher in the Bhagavad-Gītā, enables consideration of how the divine hiddenness issue is resolvable, particularly by framing awareness of God’s existence and understanding of divine attributes as an educational process encapsulated by the (...) word “yoga”. This approach further enables appreciation of the bhakti-yoga perspective—in its celebration of divine absence—as an inversion of divine hiddenness as a philosophical problem into a theological solution to the adept’s acute sense of divine absence, even while perceiving evidence of God’s existence at every turn. (shrink)

As we explore panentheism, what can we learn from Rāmānuja's Viśiṣṭādvaita? Although widely acknowledged as a panentheist, in the contemporary debate on how to characterize panentheism, Rāmānuja barely features. But Rāmānuja's position is worth studying not just because it bears on taxonomical questions. Among its interesting features is a conception on which devotional love, bhakti, serves an epistemic function that is also of crucial soteriological relevance. This chapter addresses both these topics. First, Rāmānuja's Viśiṣṭādvaita is used to cast doubt on (...) a characterization of panentheism recently proposed by Mikael Stenmark. Second, Rāmānuja's conception of bhakti is juxtaposed with two conceptions of love that serve an analogous dual function: Weil's conception of supernatural love and Murdoch's conception of love as just attention. Rāmānuja's position, it is argued, is distinct, partly due to his panentheist commitments, but it also shares a number of features with the other two. In closing, it is suggested that for further comparative work on these three, ample room remains. (shrink)

“It is probably justified in requiring a transformation of the image of the real world as it has been constructed in the last 300 years… [for] now it seems to work no longer. One must therefore go back 300 years and reflect on how one could have proceeded differently at that time, and how the whole subsequent development would then be modified. No wonder that puts us into boundless confusion!” :: a letter from Schrödinger to Einstein in 1950 -/- The (...) theme of the new book, Idols of the Mind vs True Reality by Bhakti Madhava Puri, Ph.D. is concerned with the clear exposition of the pivotal conceptions and misconceptions of Galileo’s and others’ ideas that produced the subsequent development of what would become modern mathematized science. -/- The confusions and almost complete ignorance that exist today regarding something so fundamental as consciousness is immediately cleared up when the obvious errors are seen in the ad hoc presumptions of the original founders of modern science who were blindsided by the metaphysical ontologies that held sway during their lives, but to which we no longer adhere, thanks to the development of philosophy beyond that period. We trace this progress out in a concise way in the book. -/- The modern mind, thanks to science education, is focused on the one-sided empirical approach to knowledge by sensuous perception, but this fails to account for the role of subjective cognition or conception – the role of consciousness in such perceptions. This artificial separation of the original unity-in-difference between conception and content has been rendered impossible to broach because of the historical metaphysical tradition of dualism firmly held by the fathers of modern science such as Galileo and Descartes. -/- The presumed impossible gap between subject and object is bridged once we realize that the object is what the subject knows it to be. This does not reduce the object to the subject as the abstract idealists (monists) naively are only too hasty to presume as an immediate identity (oneness). Mediation is involved; there are both difference and identity at play. It is merely lazy un-thinking that ignores the intricate dynamic in the mediating activity that is the heart and life of consciousness. The main purpose of the book is to restore the central importance of the conceptual moment that is integral to science and which makes it truly worthy of the name Science or scientific knowledge. (shrink)

The analytical understanding cannot deal with integral wholes and therefore cannot understand the soul or God. The material body is illusory in the sense that it cannot be understood in its true identity without knowing its relationship to God. Analyzing its composition in terms of separated molecules or neurons is also illusory. To understand how to go from an untrue or partially true part to its truth in the whole a method developed by Hegel called conceptual thinking is required. Reproduction (...) is not merely concerned with individuals, it involves the genus or genus process. The universal that determines the species is not changed when particulars under the universal change, die, reproduce according to their “own kind” or species. Without connecting the individual organisms with their species we may wrongly think they can evolve into any species by chance. But this is not how individual and species are related to each other. The species determines how the individuals will appear and controls their reproduction, growth, and so on. They are not independent to become what they want by choice or by chance. Everyone calls themselves “I” so “I” is a universal, although each means only oneself. In the same way each organism is identified with its species, although we mean its own particular organism – for example, a dog and not canine in general. Thus the universal and particular cannot be separated from each other. Similarly individuals who identify only personal reason independent of universal Reason are misconceiving their true identity. At the same time universal and particular are related, they are not the same but a unity in difference. The universal by itself is as abstract as the particular by itself. At the same time their relation can only be comprehended within a higher unity, the higher Self or Supreme Individual. (shrink)

Gregor Mendel (1822-1884) was the first to explain that certain 'traits' were inherited in plants from one generation to the next. These would later become known as genes. Frederich Miescher in 1869 analyzed a substance from the nucleus of cells, which he therefore called nuclein. Further study of nuclein revealed that it contained elements like hydrogen, oxygen, nitrogen and phosphorous, with a specific ratio of nitrogen to phosphorous. Then in 1878 Albrecht Kossel determined that nuclein contained nucleic acid, from which (...) he isolated five nucleobases (nitrogen compounds now referred to by the letters C, G, A, T, U representing cytosine, guanine, adenine, thymine, and uracil). It was also discovered that ribose, a sugar was present in the nuclein compound. What Miescher had isolated from the cell nucleus was actually what would latter be identified as DNA (Deoxyribonucleic acid). C. H. Waddington (1905 - 1975) first proposed the term “epigenetics” in 1942 to describe the region between the gene and the whole organism (phenotype) [3]. Today, what is called the epigenome refers to all the chromosomal modifications, DNA modifications, chromatin protein modifications and their complexes. It is the epigenome that determines both the expression of the genes and their inheritance. R. A. Jorgenson reports [4], "Many of these modifications appear to be “programmable” and to be “read out” to influence chromosomal functions." Nobel laureate Barbara McClintock stated this revolutionary proposal more clearly in her Nobel lecture [5], “to determine the extent of knowledge the cell has of itself, and how it utilizes this knowledge in a ‘thoughtful’ manner when challenged.” In 1960 R. A. Brinks suggested that chromosomes possess a paragenetic function in addition to their genetic function [7]. The physical nature of the paragenetic function is characterized by the variety of forms or states of chromatin that can reside at any genetic locus. While the genetic function is stable, the paragenetic function is labile and programmable in ontogeny. It is this latter function that allows organisms to transfer informational macromolecules (RNA and proteins) in a systematic and regulated manner over what is known as the “RNA information superhighway.” Given this capacity, organisms may be able to store information at numerous genetic loci in the form of paragenetic chromatin states, which can be reprogrammed during ontogeny or environmental stress [8]. This reprogrammable system could operate over the whole organism as a storage device, allowing it to make informed ‘decisions' during growth and development, or in response to the environment. Such processing capacity could be considered a form of ‘intelligence,' which also could be passed on to future generations. The study of the flow of information within and between cells and organisms represents the cutting edge of modern biological research. While physical correlates of cognitive behavior in living organisms are being discovered, it does not spell reduction to such correlates. The electronic activity within the physical components of a radio, for example, may be minutely determined, but ultimately it is not merely the electrical activity that produces the intelligent speech that is heard. Only the intelligent person whose voice is being broadcast through the radio can explain that. Without the broadcaster, the radio would sit silently even though fully functional. An organism without its living agency also appears to be devoid of metabolic activity although all the chemical components are fully present. How to connect life to matter will be the ultimate challenge that has to be met. This will prove to be a philosophical problem we hope to address in the near future. (shrink)