We explore the crucial role of diagrams in scientific reasoning, especially reasoning directed at developing mechanistic explanations of biological phenomena. We offer a case study focusing on one research project that resulted in a published paper advancing a new understanding of the mechanism by which the central circadian oscillator in Synechococcus elongatus controls gene expression. By examining how the diagrams prepared for the paper developed over the course of multiple drafts, we show how the process of generating a new explanation (...) vitally involved the development and integration of multiple versions of different types of diagrams, and how reasoning about the mechanism proceeded in tandem with the development of the diagrams used to represent it. (shrink)

Functional decomposition is an important goal in the life sciences, and is central to mechanistic explanation and explanatory reduction. A growing literature in philosophy of science, however, has challenged decomposition-based notions of explanation. ‘Holists’ posit that complex systems exhibit context-sensitivity, dynamic interaction, and network dependence, and that these properties undermine decomposition. They then infer from the failure of decomposition to the failure of mechanistic explanation and reduction. I argue that complexity, so construed, is only incompatible with one notion of decomposition, (...) which I call ‘atomism’, and not with decomposition writ large. Atomism posits that function ascriptions must be made to parts with minimal reference to the surrounding system. Complexity does indeed falsify atomism, but I contend that there is a weaker, ‘contextualist’ notion of decomposition that is fully compatible with the properties that holists cite. Contextualism suggests that the function of parts can shift with external context, and that interactions with other parts might help determine their context-appropriate functions. This still admits of functional decomposition within a given context. I will give examples based on the notion of oscillatory multiplexing in systems neuroscience. If contextualism is feasible, then holist inferences are faulty—one cannot infer from the presence of complexity to the failure of decomposition, mechanism, and reductionism. (shrink)

When doing mental ontology, we must ask how to individuate distinct categories of mental states, and then, given that individuation, ask how states from distinct categories interact. One promising proposal for how to individuate cognitive from sensorimotor states is in terms of their representational form. On these views, cognitive representations are propositional in structure, while sensorimotor representations have an internal structure that maps to the perceptual and kinematic dimensions involved in an action context. This way of thinking has resulted in (...) worries about the interface between cognition and sensorimotor systems – that is, about how representations of these distinct types might interact in performing actions. I claim that current solutions to the interface problem fail, because they have not sufficiently abandoned intuitions inspired by faculty psychology. In particular, current proposals seek to show how cognitive states can enforce prior decisions on sensorimotor systems. I argue that such “determination” views are the wrong kind of views to adopt, given the form distinction. Instead, I offer a proposal on which propositional representations can at best bias us toward certain kinds of action. This kind of view, I argue, appealingly distributes the explanation of action across distinctive contributions from cognitive and sensorimotor processing. (shrink)

I argue that discussions of cognitive penetration have been insufficiently clear about what distinguishes perception and cognition, and what kind of relationship between the two is supposed to be at stake in the debate. A strong reading, which is compatible with many characterizations of penetration, posits a highly specific and directed influence on perception. According to this view, which I call the “internal effect view” a cognitive state penetrates a perceptual process if the presence of the cognitive state causes a (...) change to the computation performed by the process, with the result being a distinct output. I produce a novel argument that this strong reading is false. On one well-motivated way of drawing the distinction between perceptual states and cognitive states, cognitive representations cannot play the computational role posited for them by IEV, vis-à-vis perception. This does not mean, however, that there are not important causal relationships between cognitive and perceptual states. I introduce an alternative view of these relationships, the “external effect view”. EEV posits that each cognitive state is associated with a broad range of possible perceptual outcomes, and biases perception towards any of those perceptual outcomes without determining specific perceptual contents. I argue that EEV captures the kinds of cases philosophers have thought to be evidence for IEV, and a wide range of other cases as well. (shrink)

Functional localization has historically been one of the primary goals of neuroscience. There is still debate, however, about whether it is possible, and if so what kind of theories succeed at localization. I argue for a contextualist approach to localization. Most theorists assume that widespread contextual variability in function is fundamentally incompatible with functional decomposition in the brain, because contextualist accounts will fail to be generalizable and projectable. I argue that this assumption is misplaced. A properly articulated contextualism can ground (...) successful theories of localization even without positing completely generalizable accounts. Via a case study from perceptual neuroscience, I suggest that there is strong evidence for contextual variation in the function of perceptual brain areas. I then outline a version of contextualism that is empirically adequate with respect to this data, and claim that it can still distinguish brain areas from each other according to their functional properties. Finally, I claim that the view does not fail the norms for good theory in the way that anticontextualists suppose. It is true that, on a contextualist view, we will not have theories that are completely generalizable and predictive. We can, however, have successful partial generalizations that structure ongoing investigation and lead to novel functional insight, and this success is sufficient to ground the project of functional localization. (shrink)

The standard assumption for what perception must do in order to represent a “higher level” content—say, tiger—is that it must represent the kind as such. I argue that this “as such condition” is not constitutive of what it means for a content to be “higher‐level”, and that embracing it produces a range of unfortunate dialectical consequences. After offering this critique, I give an alternative construal, the “extended perceptual space” view of higher‐level contents. This view captures the phenomena targeted by the (...) “higher‐level content” thesis, is empirically supported, and avoids the negative dialectical consequences of the as such condition. (shrink)

Despite their popularity, relatively scant attention has been paid to the upshot of Bayesian and predictive processing models of cognition for views of overall cognitive architecture. Many of these models are hierarchical ; they posit generative models at multiple distinct "levels," whose job is to predict the consequences of sensory input at lower levels. I articulate one possible position that could be implied by these models, namely, that there is a continuous hierarchy of perception, cognition, and action control comprising levels (...) of generative models. I argue that this view is not entailed by a general Bayesian/predictive processing outlook. Bayesian approaches are compatible with distinct formats of mental representation. Focusing on Bayesian approaches to motor control, I argue that the junctures between different types of mental representation are places where the transitivity of hierarchical prediction may be broken, and I consider the upshot of this conclusion for broader discussions of cognitive architecture. (shrink)

It is a widespread assumption in philosophy of science that data is what is explained by theory—that data itself is not explanatory. I draw on instances of representational and explanatory practice from mammalian chronobiology to suggest that this assumption is unsustainable. In many instances, biologists employ representations of data in explanatory ways that are not reducible to constraints on or evidence for representations of mechanisms. Data graphs are used to exemplify relationships between quantities in the mechanism, and often these representations (...) are necessary for explaining particular aspects of the phenomena under study. I argue that this kind of representation is distinct from representing laws or generalizations, and its primary purpose is to convey particular types or patterns of quantitative relationships. The benefit of the analysis is two-fold. First, it provides a more accurate account of explanatory practice in broadly mechanistic analysis in biology. Second, it suggests that there is not an explanatory “fundamental” type of representation in biology. Rather, the practice of explanation consists in the construction of different types of representations and their employment for distinct explanatory purposes. (shrink)

In this paper I criticize a view of functional localization in neuroscience, which I call “computational absolutism”. “Absolutism” in general is the view that each part of the brain should be given a single, univocal function ascription. Traditional varieties of absolutism posit that each part of the brain processes a particular type of information and/or performs a specific task. These function attributions are currently beset by physiological evidence which seems to suggest that brain areas are multifunctional—that they process distinct information (...) and perform different tasks depending on context. Many theorists take this contextual variation as inimical to successful localization, and claim that we can avoid it by changing our functional descriptions to computational descriptions. The idea is that we can have highly generalizable and predictive functional theories if we can discover a single computation performed by each area regardless of the specific context in which it operates. I argue, drawing on computational models of perceptual area MT, that this computational version of absolutism fails to come through on its promises. In MT, the modeling field has not produced a univocal computational description, but instead a plurality of models analyzing different aspects of MT function. Moreover, CA cannot appeal to theoretical unification to solve this problem, since highly general models, on their own, neither explain nor predict what MT does in any particular context. I close by offering a perspective on neural modeling inspired by Nancy Cartwright’s and Margaret Morrison’s views of modeling in the physical sciences. (shrink)

: Fodor’s view of the mind is thoroughly computational. This means that the basic kind of mental entity is a “discursive” mental representation and operations over this kind of mental representation have broad architectural scope, extending out to the edges of perception and the motor system. However, in multiple epochs of his work, Fodor attempted to define a functional role for non-discursive, imagistic representation. I describe and critique his two considered proposals. The first view says that images play a particular (...) kind of functional role in certain types of deliberative tasks. The second says that images are solely restricted to the borders of perception, and act as a sort of medium for the fixing of conceptual reference. I argue, against the first proposal, that a broad-scope computationalism such as Fodor’s renders images in principle functionally redundant. I argue, against the second proposal, that empirical evidence suggests that non-discursive representations are learned through perceptual learning, and directly inform category judgments. In each case, I point out extant debates for which the arguments are relevant. The upshot is that there is motivation for limited scope computationalism, in which some, but not all, mental processes operate on discursive mental representations. Keywords: Computational Theory of Mind; Mental Representation; Perception; Mental Image; Jerry Fodor Fodor e le rappresentazioni mentali come immagini Riassunto: La concezione della mente di Fodor è rigorosamente computazionale, ossia le entità mentali di base sono rappresentazioni mentali “discorsive”. Le operazioni su queste rappresentazioni hanno un fine architettonico ampio, che va fino ai confini della percezione e del sistema motorio. In periodi diversi del suo lavoro, Fodor ha proposto due modi per definire un ruolo funzionale per la rappresentazione non-discorsiva come immagine. Tratterò criticamente entrambi. Per il primo, le immagini giocano un particolare tipo di ruolo funzionale in certi tipi di compiti deliberativi, mentre, per il secondo, sono relegate unicamente ai confini della percezione, agendo come medium per fissare il riferimento concettuale. Contro il primo sosterrò che un computazionalismo così ampio come quello di Fodor rende le immagini in principio funzionalmente ridondanti. Contro il secondo sosterrò che l’evidenza empirica suggerisce che le rappresentazioni non-discorsive vengono apprese percettivamente, agendo direttamente sui giudizi di categorizzazione. In entrambi i casi considererò gli argomenti più rilevanti nel dibattito corrente. Si vedrà che ci sono buone ragioni in favore di un computazionalismo più limitato, in cui alcuni processi mentali operano su rappresentazioni mentali discorsive. Parole chiave: Teoria computazionale della mente; Rappresentazione mentale; Percezione; Immagine mentale; Jerry Fodor. (shrink)

_Abstract_: We argue that theoretical debates in biology and cognitive science often are based around differences in the posited _locus of control _for biological and cognitive phenomena. Internalists about locus of control posit that specific causal control over the phenomenon is exerted by factors internal (to the relevant subsystem) of an organism. Externalists posit that causally specific influence is due to external factors. In theoretical biology, we suggest, a minimal agreement has developed that the locus of control for heritable variation (...) is _distributed _– that is, both internal and external factors exert specific, non-redundant causal influence on evolved traits. We suggest that debates in cognitive science, particularly surrounding “enactivism”, should also embrace a distributed locus of control. We show how both internal and external factors contribute non-redundantly to psychological capacities and behavior. We further suggest that embracing a distributed locus of control provides a basis for a revisionary, but substantive account of “mental representation”. _Keywords_: Locus of control; Internalism/Externalism; Evolutionary Biology; Cognitive Science; Mental Representation _ Loci di controllo distribuiti: superare le vecchie dicotomie nella biologia e nella scienza cognitiva _ _Riassunto_: Numerose discussioni in biologia e nella scienza cognitiva vertono spesso su differenze nella individuazione del _locus di controllo_ dei fenomeni biologici e cognitivi. Posizioni internaliste rispetto al _locus di controllo_ ritengono che il controllo causale specifico su un fenomeno biologico o cognitivo venga esercitato da fattori interni a (un sottosistema rilevante) di un organismo. Al contrario, posizioni esternaliste assumono che specifiche influenze causali siano dovute a fattori esterni. In questo articolo mostriamo che nell’ambito della biologia teorica si è giunti a un minimo accordo rispetto al fatto che il _locus di controllo_ per l’emergere di variazioni ereditarie è _distribuito _– ossia dovuto sia a fattori interni che esterni all’organismo che esercitano influenze specifiche e non-ridondanti sui tratti che si sono evoluti. Riteniamo che tale accordo debba essere raggiunto anche nell’ambito della scienza cognitiva, in particolare per quel che concerne l’_enattivismo_. In questo articolo mostriamo che sia i fattori interni che quelli esterni contribuiscono in maniera non-ridondante alle capacità psicologiche e al comportamento di un individuo. Inoltre sosterremo che l’adozione di un _locus di controllo _distribuito possa costituire un buon punto di partenza per una revisione sostanziale della nozione di “rappresentazione mentale”. _Parole chiave_: Locus di controllo causale; Internalismo/Esternalismo; Biologia evolutiva; Scienze cognitive; Rappresentazione mentale _ _. (shrink)

Intentions are commonly conceived of as discrete mental states that are the direct cause of actions. In the last several decades, neuroscientists have taken up the project of finding the neural implementation of intentions, and a number of areas have been posited as implementing these states. We argue, however, that the processes underlying action initiation and control are considerably more dynamic and context sensitive than the concept of intention can allow for. Therefore, adopting the notion of ‘intention’ in neuroscientific explanations (...) can easily lead to misinterpretation of the data, and can negatively influence investigation into the neural correlates of intentional action.We suggest reinterpreting the mechanisms underlying intentional action, and we will discuss the elements that such a reinterpretation needs to account for. (shrink)

The notion of representation in neuroscience has largely been predicated on localizing the components of computational processes that explain cognitive function. On this view, which I call “algorithmic homuncularism,” individual, spatially and temporally distinct parts of the brain serve as vehicles for distinct contents, and the causal relationships between them implement the transformations specified by an algorithm. This view has a widespread influence in philosophy and cognitive neuroscience, and has recently been ably articulated and defended by Shea. Still, I am (...) skeptical about algorithmic homuncularism, and I argue against it by focusing on recent methods for complex data analysis in systems neuroscience. I claim that analyses such as principle components analysis and linear discriminant analysis prevent individuating vehicles as algorithmic homuncularism recommends. Rather, each individual part contributes to a global state space, trajectories of which vary with important task parameters. I argue that, while homuncularism is false, this view still supports a kind of “vehicle realism,” and I apply this view to debates about the explanatory role of representation. (shrink)

I draw on empirical results from perceptual and motor learning to argue for an anti-intellectualist position on skill. Anti-intellectualists claim that skill or know-how is non-propositional. Recent proponents of the view have stressed the flexible but fine-grained nature of skilled control as supporting their position. However, they have left the nature of the mental representations underlying such control undertheorized. This leaves open several possible strategies for the intellectualist, particularly with regard to skill learning. Propositional knowledge may structure the inputs to (...) sensorimotor learning, may constitute the outcomes of said learning, or may be needed for the employment of learned skill. I argue that sensorimotor learning produces multi-scale associational representations, and that these representations are of the right sort to underlie flexible and fine-grained control. I then suggest that their content is vitally indeterminate with regard to propositional content attribution, because they exhibit a kind of open-ended structure. I articulate this kind of structure, and use it to respond to the three intellectualist strategies. I then show how the perspective I advance offers insights for understanding both instruction and expert practice. (shrink)

In discussion of mechanisms, philosophers often debate about whether quantitative descriptions of generalizations or qualitative descriptions of operations are explanatorily fundamental. I argue that these debates have erred by conflating the explanatory roles of generalizations and patterns. Patterns are types of variations within or between quantities in a mechanism over time or across conditions. While these patterns must often be represented in addition to descriptions of operations in order to explain a phenomenon, they are not equivalent to generalizations because their (...) explanatory role does not depend on any specific facts about their scope or domain of invariance. (shrink)

On page 3653, there is a mistake in the explanation of the Cornsweet illusion. In fact, the explanation is that the panel perceived as darker is facing towards the light source—in the case of this figure the light is coming from the right.

In several works, Ruth Millikan has developed a ‘teleosemantic’ theory of concepts. Millikan’s theory has three explicit desiderata for concepts: wide scope, non-descriptionist content, and naturalism. I contend that Millikan’s theory cannot fulfill all of these desiderata simultaneously. Theoretical concepts, such as those of chemistry and physics, fall under Millikan’s intended scope, but I will argue that her theory cannot account for these concepts in a way that is compatible with both non-descriptionism and naturalism. In these cases, Millikan’s view is (...) subject to the traditional ‘indeterminacy problem’ for teleosemantic theories. This leaves the content of theoretical concepts indeterminate between a descriptionist and non-descriptionist content. Furthermore, this problem cannot be overcome without giving up the naturalism desideratum. I suggest that the scope of Millikan’s theory should be limited. At best, the theory will be able to attribute naturalistic, non-descriptionist content to a smaller range of concepts. (shrink)

This book develops an Aristotelian account of the virtue of practical intelligence or "phronesis"--an excellence of deliberating and making choices--which ...

1. Happiness, then and now -- Happiness, eudaimonia, and practical reasoning -- Happiness as eudaimonia -- Happiness and virtuous activity -- New directions from old debates -- 2. Happiness then: the sufficiency debate -- Aristotle's case against the sufficiency thesis -- 3. Happiness now: rethinking the self -- Socrates' case for the sufficiency thesis -- Epictetus and the stoic self -- The Stoics' case for the sufficiency thesis -- The embodied conception of the self -- The embodied conception and psychological (...) well-being -- The Stoics' case against the embodied conception. (shrink)

In this volume of newly commissioned essays, leading moral philosophers offer a comprehensive overview of virtue ethics.

Scientific disagreements are an important catalyst for scientific progress. But what happens when scientists disagree amidst times of crisis, when we need quick yet reliable policy guidance? In this paper we provide a normative account for how scientists facing disagreement in the context of ‘fast science’ should respond, and how policy makers should evaluate such disagreement. Starting from an argumentative, pragma-dialectic account of scientific controversies, we argue for the importance of ‘higher-order evidence’ (HOE) and we specify desiderata for scientifically relevant (...) HOE. We use our account to analyze the controversy about the aerosol transmission of COVID-19. (shrink)

A memoir by one of the greatest minds of our age, preeminent philosopher and cognitive scientist Daniel C. Dennett.

Ethologists and others studying animal behavior in a spirit are in need of a descriptive language and method that are neither anachronistically bound by behaviorist scruples nor prematurely committed to particular Just such an interim descriptive method can be found in intentional system theory. The use of intentional system theory is illustrated with the case of the apparently communicative behavior of vervet monkeys. A way of using the theory to generate data - including usable, testable data - is sketched. The (...) underlying assumptions of this approach can be seen to ally it directly with theorizing in evolutionary biology, which has recently come under attack from Stephen Gould and Richard Lewontin, who castigate it as the Their arguments, which are strongly analogous to B. F, Skinner's arguments against point to certain pitfalls that attend the careless exercise of such thinking (and rival varieties of thinking as well), but do not constitute a fundamental objection to either adaptationist theorizing or its cousin, intentional system theory. (shrink)

What do these various heresies have in common? From Fodor's point of view, two things, obviously: (1) they are all wrong, wrong, wrong! and (2) they are endorsed by people who are otherwise quite decent company. That would be thread enough to tie Fodor's targets together if he were right, but as one who finds more than a morsel of truth in each of the derided doctrines, I must seek elsewhere for a uniting principle, and I think I have found (...) it: they are all doctrines that make Fodor's Granny exclaim "Well I never!" and lurch alarmingly in her rocker. The cat is out of the bag. Jerry Fodor is a Granny's boy, a romantic conservative whose slogan might well be. (shrink)

A smoothly running automobile is one of life’s delights; it enables you to get where you need to get, on time, with great reliability, and for the most part, you get there in style, with music playing, air conditioning keeping you comfortable, and GPS guiding your path. We tend to take cars for granted in the developed world, treating them as one of life’s constants, a resource that is always available. We plan our life’s projects with the assumption that of (...) course a car will be part of our environment. But when your car breaks down, your life is seriously disrupted. Unless you are a serious car buff with technical training you confront your dependence on a web of tow-truck operators, mechanics, car dealers, and much more. At some point, you decide to trade in your increasingly unreliable car and start afresh with a brand new model. Life goes on, with hardly a ripple. (shrink)

Little, Brown, 1992 Review by Glenn Branch on Jul 5th 1999 Volume: 3, Number: 27.

This collection of 17 essays by the author offers a comprehensive theory of mind, encompassing traditional issues of consciousness and free will.

Intentional explanation and attributions of mentality -- International systems -- Reply to Arbib and Gunderson -- Brain writing and mind reading -- The nature of theory in psychology -- Skinner skinned -- Why the law of effect will not go away -- A cure for the common code? -- Artificial intelligence as philosophy and as psychology -- Objects of consciousness and the nature of experience -- Are dreams experiences? -- Toward a cognitive theory of consciousness -- Two approaches to mental (...) images -- Why you can't make a computer that feels pain -- Free will and personhood -- Mechanism and responsibility -- The abilities of men and machines -- Conditions of personhood -- On giving libertarians what they say they want -- How to change your mind -- Where am I? (shrink)

This paperback edition contains a preface placing the book in the context of recent work in the area.

Are there really beliefs? Or are we learning (from neuroscience and psychology, presumably) that, strictly speaking, beliefs are figments of our imagination, items in a superceded ontology? Philosophers generally regard such ontological questions as admitting just two possible answers: either beliefs exist or they don't. There is no such state as quasi-existence; there are no stable doctrines of semi-realism. Beliefs must either be vindicated along with the viruses or banished along with the banshees. A bracing conviction prevails, then, to the (...) effect that when it comes to beliefs (and other mental items) one must be either a realist or an eliminative materialist. (shrink)

" Qualia " is an unfamiliar term for something that could not be more familiar to each of us: the ways things seem to us. As is so often the case with philosophical jargon, it is easier to give examples than to give a definition of the term. Look at a glass of milk at sunset; the way it looks to you--the particular, personal, subjective visual quality of the glass of milk is the quale of your visual experience at the (...) moment. The way the milk tastes to you then is another, gustatory quale, and how it sounds to you as you swallow is an auditory quale; These various "properties of conscious experience" are prime examples of qualia. Nothing, it seems, could you know more intimately than your own qualia ; let the entire universe be some vast illusion, some mere figment of Descartes' evil demon, and yet what the figment is made of will be the qualia of your hallucinatory experiences. Descartes claimed to doubt everything that could be doubted, but he never doubted that his conscious experiences had qualia, the properties by which he knew or apprehended them. (shrink)

_Behavioral and Brain Sciences_ , 15, 183-247, 1992. Reprinted in _The Philosopher's Annual_ , Grim, Mar and Williams, eds., vol. XV-1992, 1994, pp. 23-68; Noel Sheehy and Tony Chapman, eds., _Cognitive Science_ , Vol. I, Elgar, 1995, pp.210-274.